DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jub and Fblim1

DIOPT Version :10

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_598515.3 Gene:Fblim1 / 74202 MGIID:1921452 Length:375 Species:Mus musculus


Alignment Length:352 Identity:112/352 - (31%)
Similarity:163/352 - (46%) Gaps:49/352 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 GLATGRAAATGAPAQRTVQEPPIITSSLAMGMATAAPPTTSNAPTSAAAAPAAPTSTASLRATPI 437
            |.|.||:..|..|:.:|......:|..|:.|..:..||:.:.........|..|:          
Mouse    52 GAAVGRSPKTWTPSGKTNASLSGVTPQLSNGGCSLPPPSLNEEDLDLPPPPPPPS---------- 106

  Fly   438 AMTAPLAVATSPTPSQGSTAVNAALKPRRGLTKNLLPYSVTPPRPAGPTEAQRK----------- 491
                    |..|.|.:     ...:.|.:.|..:|....:.||.|..|.:|..|           
Mouse   107 --------AYLPLPEE-----EPPVLPGKSLISDLEQLHLPPPPPPPPPQAPSKGSSVHPPPGHA 158

  Fly   492 ---IEELTRQLEEEI--EQSEEHGEYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRAL 551
               .|||....||.:  .:.|...:..|.||   :.|.....|.:||...||..||.|.:|.|.|
Mouse   159 IPSEEELPPPPEEPVTLPEREVSTDVCGFCH---KPVSPRELAVEAMKRQYHAQCFTCRTCRRQL 220

  Fly   552 RGKAFYNVHGRVYCEEDYMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDG 616
            .|:.||...||..||..|     |.|.|||..||.::.|.:::|:||::||.||.|..|..|:..
Mouse   221 AGQRFYQKDGRPLCEPCY-----QDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISD 280

  Fly   617 VPFTVDVDHKIYCVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQL 681
            ..|.:|..:::|||.|::|.|||.|:.|...|.|.:|.| ..::..|.::||.:||.||:|.:.|
Mouse   281 ESFALDSQNQVYCVADFYRKFAPVCSICENPIIPRDGKD-AFKIECMGRNFHENCYRCEDCSVLL 344

  Fly   682 TDEP-DKRCYPLDGRLLCRGCHLQRLA 707
            :.|| |:.||||:..|.|:.|||:|.|
Mouse   345 SVEPTDQGCYPLNDHLFCKPCHLKRSA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 21/52 (40%)
LIM2_Ajuba_like 581..633 CDD:188741 19/51 (37%)
LIM3_Ajuba_like 641..702 CDD:188822 24/61 (39%)
Fblim1NP_598515.3 Filamin-binding. /evidence=ECO:0000250 1..69 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..176 31/146 (21%)
LIM <181..238 CDD:413332 22/59 (37%)
LIM2_FBLP-1 245..297 CDD:188758 19/51 (37%)
FERMT2-binding. /evidence=ECO:0000250 278..375 39/95 (41%)
LIM3_Zyxin_like 305..366 CDD:188743 24/61 (39%)

Return to query results.
Submit another query.