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Protein Alignment jub and Fhl2

DIOPT Version :9

Sequence 1:	NP_572930.3	Gene:	jub / 32351	FlyBaseID:	FBgn0030530	Length:	728	Species:	Drosophila melanogaster
Sequence 2:	NP_113865.1	Gene:	Fhl2 / 63839	RGDID:	61963	Length:	279	Species:	Rattus norvegicus

Alignment Length:	197	Identity:	50/197 - (25%)
Similarity:	82/197 - (41%)	Gaps:	23/197 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   511 EYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGFQ 575
            ||...|..|.:.:....:..:..|:.:|..||.|..|.:.:..|:|.....:.:|...|.    :
  Rat    96 EYSSKCQECKKTIMPGTRKMEYKGSSWHETCFTCQRCQQPIGTKSFIPKENQNFCVPCYE----K 156

  Fly   576 QTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIYCVNDYHRMFAPK 640
            |.|.:|..|...|....:....:.:|..||.|..|.:.|.|..||.. |...||:..:..::|.|
  Rat   157 QYALQCVQCKKPITTGGVTYRDQPWHRECFVCTACKKQLSGQRFTAR-DEFPYCLTCFCDLYAKK 220

  Fly   641 CASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQ------LTDEPDKRCYPLDGRLLCR 699
            ||.|   ..|:.|...|..:...::.:|.||:.|::|.:.      ||:..|         :||.
  Rat   221 CAGC---TNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDD---------ILCP 273

  Fly   700 GC 701
            .|
  Rat   274 DC 275

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.