DRSC/TRiP Functional Genomics Resources

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Protein Alignment jub and Fhl5

DIOPT Version :9

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_001342427.1 Gene:Fhl5 / 57756 MGIID:1913192 Length:284 Species:Mus musculus


Alignment Length:204 Identity:49/204 - (24%)
Similarity:80/204 - (39%) Gaps:47/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 CHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYC----EEDYMYSGFQQ 576
            |..|...:....:..:..||.:|..||:|..|.:.:..|...:.....||    |:::       
Mouse   102 CFHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEF------- 159

  Fly   577 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECL--------DGVPFTVDVDHKIYCVNDY 633
             |..|..|..:|....:....:.:|..||.|..|.:.|        |..||         |::.|
Mouse   160 -AHYCNFCKKVITSGGITFRDQIWHKECFLCSGCRKELYEEAFMSKDDFPF---------CLDCY 214

  Fly   634 HRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQLTDEPDKRCYPLDG---- 694
            :.::|.|||:|.|.||.:.|..   .:...|:.:|.:|:.|.:|.:.|..|         |    
Mouse   215 NHLYAKKCAACTKPITGLRGAK---FICFQDRQWHSECFNCGKCSVSLVGE---------GFLTH 267

  Fly   695 --RLLCRGC 701
              .:|||.|
Mouse   268 NMEILCRKC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 13/56 (23%)
LIM2_Ajuba_like 581..633 CDD:188741 13/59 (22%)
LIM3_Ajuba_like 641..702 CDD:188822 19/67 (28%)
Fhl5NP_001342427.1 LIM <3..34 CDD:413332
LIM1_FHL 37..95 CDD:188729
LIM2_FHL5 102..155 CDD:188812 12/52 (23%)
LIM 163..214 CDD:413332 13/59 (22%)
LIM4_FHL 222..277 CDD:188733 19/67 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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