DRSC/TRiP Functional Genomics Resources

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Protein Alignment jub and prickle3

DIOPT Version :9

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:XP_698649.4 Gene:prickle3 / 570116 ZFINID:ZDB-GENE-081105-86 Length:783 Species:Danio rerio


Alignment Length:274 Identity:67/274 - (24%)
Similarity:103/274 - (37%) Gaps:59/274 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 YSVTP----PRPAGPTEAQRKIEELTRQL--------------EEEIEQ-----SEEHGEYFG-- 514
            ||..|    |....|.|..| |::|..||              |||.::     .:...|..|  
Zfish   108 YSCIPEDKVPYVNSPGERYR-IKQLLHQLPAHDSEPQYCNSLDEEEKKELRLFSQQRKRENLGRG 171

  Fly   515 ------------ICHTCGEKVKGAGQACQAM----GNLYHTNCFICCSCGRALRGKAFYNVHGRV 563
                        ||..||.::.|...|..|.    |:.:|..||.|.||...|....::...|.:
Zfish   172 IVRLFPVTMTGAICQQCGRQICGGDIAVFASRAGHGSCWHPQCFQCASCNELLVDLIYFYQDGHI 236

  Fly   564 YCEEDYMYSGFQQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKI 627
            ||...:.    :....:|..|..:|. :...:|.|:.:|...|.|..|...|.|..:.:. :.:.
Zfish   237 YCGRHHA----EHIKPRCQACDEIIFADECTEAEGRHWHMKHFCCFECEAALGGQRYIMR-ESRP 296

  Fly   628 YCVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHV--DCYICEECGMQLTDEPDKRCY 690
            ||...|..::|..|.:||:.|    |.|:. ::....:.:|.  .|:.|..|.:.|...|   ..
Zfish   297 YCCRCYESLYAEYCDTCGEHI----GIDQG-QMTYEGQHWHASEQCFCCACCRLPLLGRP---FL 353

  Fly   691 PLDGRLLC-RGCHL 703
            |..|.:.| |.|.|
Zfish   354 PRGGLIFCSRSCSL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 17/56 (30%)
LIM2_Ajuba_like 581..633 CDD:188741 13/52 (25%)
LIM3_Ajuba_like 641..702 CDD:188822 16/63 (25%)
prickle3XP_698649.4 PET_Prickle 81..177 CDD:193602 16/69 (23%)
LIM1_Prickle 185..243 CDD:188799 17/57 (30%)
LIM2_Prickle 248..303 CDD:188802 13/55 (24%)
LIM3_Prickle 308..366 CDD:188804 16/65 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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