Sequence 1: | NP_572930.3 | Gene: | jub / 32351 | FlyBaseID: | FBgn0030530 | Length: | 728 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335295.1 | Gene: | lims1 / 554019 | ZFINID: | ZDB-GENE-050522-236 | Length: | 345 | Species: | Danio rerio |
Alignment Length: | 257 | Identity: | 65/257 - (25%) |
---|---|---|---|
Similarity: | 93/257 - (36%) | Gaps: | 85/257 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 516 CHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGFQQT-AE 579
Fly 580 KCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDV--------------------- 623
Fly 624 ----------------------DH-------------------KIYCVNDYHRMFAPKCASCGKG 647
Fly 648 ITPVEGTDETVRVV-SMDKDFHVDCYICEECGMQLTDEP--DKRCYPLDGRLLCRGCHLQRL 706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
jub | NP_572930.3 | LIM1_Ajuba_like | 516..569 | CDD:188738 | 18/52 (35%) |
LIM2_Ajuba_like | 581..633 | CDD:188741 | 20/113 (18%) | ||
LIM3_Ajuba_like | 641..702 | CDD:188822 | 19/63 (30%) | ||
lims1 | XP_021335295.1 | LIM1_PINCH | 21..79 | CDD:188717 | 21/62 (34%) |
LIM2_PINCH | 82..133 | CDD:188718 | 16/50 (32%) | ||
LIM3_PINCH | 146..196 | CDD:188719 | 4/49 (8%) | ||
LIM4_PINCH | 202..255 | CDD:188720 | 20/66 (30%) | ||
LIM5_PINCH | 263..316 | CDD:188721 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1704 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |