DRSC/TRiP Functional Genomics Resources

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Protein Alignment jub and fhl5

DIOPT Version :9

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_001004112.1 Gene:fhl5 / 445475 ZFINID:ZDB-GENE-040822-3 Length:280 Species:Danio rerio


Alignment Length:202 Identity:52/202 - (25%)
Similarity:84/202 - (41%) Gaps:33/202 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 EYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYC----EEDYMY 571
            ||...|.||.:.|....:..:..||.:|..||:|..|.:.:..|:|.......:|    |:.:.|
Zfish    97 EYSSKCSTCKKTVMPGSRKMEYKGNSWHETCFLCQRCQQPIGTKSFIPKDNNYFCVPCFEKQFAY 161

  Fly   572 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIYCVNDYHRM 636
                    :|..|...|....:....|.:|..||.|..|...|.|..||...::. ||::.:..:
Zfish   162 --------QCCACKKAITTGGVTYHDKPWHRECFTCIGCKRQLAGQRFTSRENYP-YCLDCFSNL 217

  Fly   637 FAPKCASCGKGITPVEGTDETVRVVSM-DKDFHVDCYICEECGMQ------LTDEPDKRCYPLDG 694
            :|.||..|.|.||.:.|    .:.:|. ::.:|.:|:.|.:|.:.      ||...|        
Zfish   218 YAKKCVGCTKAITSLAG----AKYISFEERQWHSECFTCMQCSVSLVGRGFLTQRDD-------- 270

  Fly   695 RLLCRGC 701
             :||..|
Zfish   271 -ILCTDC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 15/56 (27%)
LIM2_Ajuba_like 581..633 CDD:188741 15/51 (29%)
LIM3_Ajuba_like 641..702 CDD:188822 17/68 (25%)
fhl5NP_001004112.1 LIM <6..34 CDD:295319
LIM1_FHL 37..95 CDD:188729
LIM 102..158 CDD:295319 15/55 (27%)
LIM3_FHL 163..214 CDD:188732 15/51 (29%)
LIM4_FHL 222..277 CDD:188733 17/68 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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