DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jub and tes

DIOPT Version :9

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_991283.2 Gene:tes / 403032 ZFINID:ZDB-GENE-040718-59 Length:541 Species:Danio rerio


Alignment Length:532 Identity:120/532 - (22%)
Similarity:181/532 - (34%) Gaps:168/532 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 MHQRSISSNTASSSSLGS--PTQRYRNL-------SLPSHLS-----PVPTAQSVAKLQQHTPVK 336
            :....:...|..|..:|.  ...:|..|       .:||:.|     .||    .|.|...|.| 
Zfish    48 VEDHDVQLETEESKKVGKLFEDTKYTGLIAKLKRDGIPSYRSNQFTVSVP----AASLSSATAV- 107

  Fly   337 SPGGAINVSVNPNYIEDINSSDYVCMTANLHRNTAAGLATGRAA-ATGAPAQRTVQEPPIITSSL 400
             |.|.        :|...|.: :..:|...|..:||...||.|: ..|||               
Zfish   108 -PAGV--------FIPGSNQT-FSSITPPGHAPSAAAAGTGGASNPPGAP--------------- 147

  Fly   401 AMGMATAAPPTTSNAPTSAAAAPAAPTSTAS-----LRATPIAMTAPLAVATSPTPSQGSTAVNA 460
              |:|..|.|.......||.:......|:.:     |.|..||:.||.||   |..:....:|..
Zfish   148 --GIAPTAVPGAGRTAGSAGSGYGGGVSSGAVPGKGLSAATIAVPAPTAV---PAKTDVVKSVTY 207

  Fly   461 ALKPRRGLTKNL-LPY-SVTPP--RP-AGPTEAQRKIEELTRQLEE--------------EIEQS 506
            ...| .|:.::| |.| .:.||  || ||.|.|..:.:::.:||.:              ||:|.
Zfish   208 EWAP-PGINQSLALRYMELLPPEQRPIAGTTGADYRKKQMAKQLPDHDQDPERCHELSPGEIKQM 271

  Fly   507 EEH-----GEYFGI--------------------------------------------------- 515
            :::     .|..||                                                   
Zfish   272 QQYVRKYKDEALGIGDITLPEEMGQVGAAGDKGPQGVGAGGKPGAGTTGASGDKGDAVATVGKVG 336

  Fly   516 -----------------CHTCGEKVKGAGQACQA----MGNLYHTNCFICCSCGRALRGKAFYNV 559
                             ||.|.:.:|....|..|    ...|:|..||:||:|...|....::..
Zfish   337 APGAAGTSAGGPAGNFSCHQCQKPMKKGEPAVFAERAGYDKLWHPACFVCCTCTELLVDMIYFWK 401

  Fly   560 HGRVYCEEDYMYSGFQQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDV 623
            .|::||...|..|    ...:|..|..||. ....||.|:::|...|.|..|:..|.|..:.::.
Zfish   402 KGQLYCGRHYGDS----EKPRCGGCDELIFSNEYTQAEGQNWHLKHFCCFDCDCVLAGETYVMEK 462

  Fly   624 DHKIYCVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHVD--CYICEECGMQLTDEPD 686
            : |..|...|.:..|..|.:|.|.|.|     |:.||...:..:|.:  |:.|..|...|..:  
Zfish   463 E-KPVCKPCYMKNHAVCCVACQKPIEP-----ESQRVSYGEHHWHAEPQCFQCAGCSKCLMGQ-- 519

  Fly   687 KRCYPLDGRLLC 698
             |...|.|:|:|
Zfish   520 -RFMALQGKLIC 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 17/56 (30%)
LIM2_Ajuba_like 581..633 CDD:188741 15/52 (29%)
LIM3_Ajuba_like 641..702 CDD:188822 18/60 (30%)
tesNP_991283.2 PET_testin 205..291 CDD:193604 22/86 (26%)
Collagen 295..350 CDD:189968 0/54 (0%)
LIM1_Testin 354..411 CDD:188797 17/56 (30%)
LIM2_Testin 417..472 CDD:188800 15/55 (27%)
LIM3_Testin 479..537 CDD:188803 18/60 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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