DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment jub and lmcd1

DIOPT Version :9

Sequence 1:	NP_572930.3	Gene:	jub / 32351	FlyBaseID:	FBgn0030530	Length:	728	Species:	Drosophila melanogaster
Sequence 2:	NP_957364.2	Gene:	lmcd1 / 394045	ZFINID:	ZDB-GENE-040426-1067	Length:	342	Species:	Danio rerio

Alignment Length:	270	Identity:	61/270 - (22%)
Similarity:	95/270 - (35%)	Gaps:	61/270 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   396 ITSSLAMGMATAAPPTTSNAPTSAAAAPAAPT-STASLRATPIAMTAPLA---VATSPTPSQGST 456
            :|:.:..|..|..........|:...:...|| :|.:....|..:|..||   ::..|...:...
Zfish    67 LTAKVKGGDGTRVYKRNRMIVTNPVVSRKDPTFNTVTYDWAPTGLTQKLAMLYMSLLPEERRPVA 131

  Fly   457 AVNAALKPRRGLTKNLLPYSVTPPRPAGPTEAQRKI----------------------EELTRQL 499
            ....:|...:.||:.|..|...|......:||:.|:                      |:.|.:.
Zfish   132 GTEGSLYRHKQLTRQLPAYDHDPAYCHSLSEAELKVMAQFVKSYKEESLGVGEVALPGEKSTTKR 196

  Fly   500 EEEIEQSE-------------------EHGEYFGICHTCG------EKVKGAGQACQAMGNLYHT 539
            .|:|.|.:                   ...||:  |..||      |.|..|.:|  ....|:|.
Zfish   197 NEKISQEQPDPPLTEQTPDGAIESPVSNETEYY--CSGCGQLAAMDEPVVYADRA--GYERLWHP 257

  Fly   540 NCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGFQQTAEKCAICGHLIM-EMILQ-AMGKSYHP 602
            .||:|..||.||....::...|.:.|...|.    |....:|..|..||. :|:|| |.|..:|.
Zfish   258 ACFVCGECGEALVDLIYFWKEGALLCGRHYC----QSIRPRCLGCDELIFSDMLLQEASGHVWHK 318

  Fly   603 GCFRCCVCNE 612
            ..|.|.:|.:
Zfish   319 EHFCCWLCGQ 328

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
jub	NP_572930.3	LIM1_Ajuba_like	516..569	CDD:188738	18/58 (31%)
		LIM2_Ajuba_like	581..633	CDD:188741	13/34 (38%)
		LIM3_Ajuba_like	641..702	CDD:188822
lmcd1	NP_957364.2	PET_testin	102..189	CDD:193604	14/86 (16%)
		LIM1_Testin_like	230..287	CDD:188726	18/58 (31%)
		LIM	293..>326	CDD:295319	12/32 (38%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900