DRSC/TRiP Functional Genomics Resources

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Protein Alignment jub and Zyx

DIOPT Version :9

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster


Alignment Length:617 Identity:157/617 - (25%)
Similarity:258/617 - (41%) Gaps:157/617 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PQSPGSRQSAILNGYLLMQPIRAGRFAHTPVPENQGSASLGTTRAAGGPPP-------------- 213
            ||.|.|||.......|..||:                  :|..:...|..|              
  Fly    63 PQVPSSRQVLCSREPLYSQPL------------------IGVEKTMRGHMPFRKYLSSEFGVADT 109

  Fly   214 PSGRSAALGPTGDLEEHAAPIYENIIPHS---------GQRAQPQ------ASPATATMYQEMQP 263
            ...|...|.....||:.    .|.:..|.         |.:|:|.      ..|.:.|:.:.:..
  Fly   110 QINRKTTLDNPAILEQQ----LEALAYHKLQMEKKGLLGVQAKPTQPLNSFTKPLSKTLSKSLIY 170

  Fly   264 TSNSSGSSSTAGLDL-------NALLASPMHQRSISSNTASSSSLGSPTQRYRNLSLPSHLSPVP 321
            ::..|.......|:|       :|...|.:::.::.|:.:|:..:.|....:.:.:....|.|.|
  Fly   171 SNLGSVRKEIETLELLTDETKISASTYSNVNETAMDSSHSSTQKMLSVCTNFISDNEKDELPPPP 235

  Fly   322 TAQSV----------AKLQQHTPVKSPGGAINVSVNPNYIEDINSSDYVCMTANLHRNTAAGLAT 376
            :.:|.          |.|:.:.|:             :|:::..:::.:.:.||.:  .....||
  Fly   236 SPESAVSSSYSELRHATLEFNKPI-------------DYLQNNQTTNPLQIYANQY--AMQHDAT 285

  Fly   377 GRAAATGAPAQRTVQEPPIITSSLAMGMATAAPPTTSNAPTSAAAAPAAPTSTASLRATPIAMTA 441
            |::::|.......:...|.:..:|                         |..:.:|..:.:....
  Fly   286 GKSSSTYDSIYEPINPRPCVADTL-------------------------PRESYNLHNSYVNDNN 325

  Fly   442 P-----LAVATSPTPSQ-----GSTA-----VNAALKPRRGLTKNLLPYSVTPPRPAGPTEAQRK 491
            |     ..::.|...:|     |:..     ||:..:..:...||.:..         |||   .
  Fly   326 PNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGLKNYISI---------PTE---P 378

  Fly   492 IEELTRQLEEEIEQSEEHGEYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAF 556
            ::||               |.:|.|..|..:|.|....|.||..:||..||.|..|...|:||.|
  Fly   379 VQEL---------------ENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPF 428

  Fly   557 YNVHGRVYCEEDYMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTV 621
            |.:.|:.|||.||:     ||.|||::|...|:|.||:|.||.|||.||.|.||.:.|||:.|||
  Fly   429 YALDGKPYCEYDYL-----QTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTV 488

  Fly   622 DVDHKIYCVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQLTDEPD 686
            |..::.||:.|:|:.|||:|..|.:.|.|..|.:||:|||::|:.||::||.||:||:.|:.|.:
  Fly   489 DATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAE 553

  Fly   687 KR-CYPLDGRLLCRGCHLQRL-ALQSSPHARH 716
            .| |||||..:||:.|:.:|: ||.:...:.|
  Fly   554 GRGCYPLDDHVLCKSCNAKRVQALTNRMTSEH 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 22/52 (42%)
LIM2_Ajuba_like 581..633 CDD:188741 26/51 (51%)
LIM3_Ajuba_like 641..702 CDD:188822 29/61 (48%)
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 22/52 (42%)
LIM2_LPP 448..507 CDD:188740 30/58 (52%)
LIM3_LPP 508..575 CDD:188821 31/66 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I6624
eggNOG 1 0.900 - - E1_KOG1704
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D283353at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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