Protein Alignment jub and Prickle3

DIOPT Version :9

• Sequence 1: NP_572930.3
• Gene: jub / 32351
• FlyBaseID: FBgn0030530
• Length: 728
• Species: Drosophila melanogaster
• Sequence 2: NP_001014132.1
• Gene: Prickle3 / 317380
• RGDID: 1359685
• Length: 623
• Species: Rattus norvegicus
• Alignment Length: 309
• Identity: 73/309 - (23%)
• Similarity: 114/309 - (36%)
• Gaps: 75/309 - (24%)

  Fly   458 VNAALKPRR------GLTKNLLPYSVTPPRPAGPTEAQRKIEELTRQL--------------EEE 502
            |...|||.:      .|.::.:||..:|..       :.:|::|..||              |||
  Rat    96 VPPGLKPEQVYQFFSCLPEDKVPYVNSPGE-------KYRIKQLLHQLPPHDSEAQYCTALEEEE 153

  Fly   503 IEQ-----SEEHGEYFG--------------ICHTCGEKVKGAGQACQA----MGNLYHTNCFIC 544
            .::     .:...|..|              ||..||:::.|...|..|    :|..:|..||:|
  Rat   154 KKELRAFSQQRKRENLGRATVRIFPVTITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVC 218

  Fly   545 CSCGRALRGKAFYNVHGRVYCEEDYMYSGFQQTAE----KCAICGHLIME-MILQAMGKSYHPGC 604
            .:|...|....::...|:|||...:        ||    :|..|..:|.. ...:|.|:.:|.|.
  Rat   219 TTCQELLVDLIYFYHAGKVYCGRHH--------AECLRPRCQACDEIIFSPECTEAEGRHWHMGH 275

  Fly   605 FRCCVCNECLDGVPFTVDVDHKIYCVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHV 669
            |.|..|...|.|..:.:. ..:.:|...|....|..|..||:.|    |.|:. ::....:.:|.
  Rat   276 FCCFECEASLGGQRYVMR-QSRPHCCACYEARHAEYCDGCGEHI----GLDQG-QMAYEGQHWHA 334

  Fly   670 D--CYICEECGMQLTDEPDKRCYPLDGRLLC-RGCHLQRLALQSSPHAR 715
            .  |:.|..||..|...|   ..|..|.:.| |.|.|......:.|..|
  Rat   335 SDRCFCCSRCGRALLGRP---FLPRRGLIFCSRACSLGSETTTAGPGRR 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jub	NP_572930.3	LIM1_Ajuba_like	516..569	CDD:188738	17/56 (30%)
		LIM2_Ajuba_like	581..633	CDD:188741	13/52 (25%)
		LIM3_Ajuba_like	641..702	CDD:188822	17/63 (27%)
Prickle3	NP_001014132.1	PET_Prickle	82..178	CDD:193602	17/88 (19%)
		LIM1_Prickle	186..244	CDD:188799	17/65 (26%)
		LIM2_Prickle	249..304	CDD:188802	13/55 (24%)
		LIM3_Prickle	309..367	CDD:188804	17/65 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810