Protein Alignment jub and Lims1

DIOPT Version :9

• Sequence 1: NP_572930.3
• Gene: jub / 32351
• FlyBaseID: FBgn0030530
• Length: 728
• Species: Drosophila melanogaster
• Sequence 2: XP_006513131.1
• Gene: Lims1 / 110829
• MGIID: 1195263
• Length: 398
• Species: Mus musculus
• Alignment Length: 329
• Identity: 79/329 - (24%)
• Similarity: 122/329 - (37%)
• Gaps: 118/329 - (35%)

  Fly   456 TAVNAALKPRRGLTKNLLPYSVTPPRPAGPTEAQRKIEELTRQLEEEIEQSEEHGEYFG------ 514
            ||:|:.|:                   |...|.:|.:..|.|: ..:::..:|..:::.
Mouse    21 TALNSVLE-------------------ANGNEDERAVSNLQRR-HSDVKVYKEFCDFYAKFNMAN 65

  Fly   515 --ICHTCGEKVKG----AGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSG 573
              ...|| |:.||    |.:...:.|.|||..||:|..|.:......||...||.|||.|
Mouse    66 ALASATC-ERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHD----- 124

  Fly   574 FQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDV-------------- 623
            ||.. |..|..||..|:..:::||..|:||.||||.:|.|.|..:.|..:.
Mouse   125 FQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKA 189

  Fly   624 -----------------------------DH-------------------KIYCVNDYHRMFAPK 640
                                         ||                   ::||:..:.:|..|.
Mouse   190 RGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPI 254

  Fly   641 CASCGKGITPVEGTDETVRVV-SMDKDFHVDCYICEECGMQLTDEP--DKRCYPLDGRLLCRGCH 702
            |.:|.:   |:||     ||| :|.|.:||:.::|.:|     ::|  ..|.|...|...|. .|
Mouse   255 CGACRR---PIEG-----RVVNAMGKQWHVEHFVCAKC-----EKPFLGHRHYERKGLAYCE-TH 305

  Fly   703 LQRL 706
            ..:|
Mouse   306 YNQL 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jub	NP_572930.3	LIM1_Ajuba_like	516..569	CDD:188738	21/56 (38%)
		LIM2_Ajuba_like	581..633	CDD:188741	21/113 (19%)
		LIM3_Ajuba_like	641..702	CDD:188822	19/63 (30%)
Lims1	XP_006513131.1	LIM1_PINCH	72..130	CDD:188717	23/63 (37%)
		LIM2_PINCH	133..184	CDD:188718	17/50 (34%)
		LIM3_PINCH	197..247	CDD:188719	4/49 (8%)
		LIM4_PINCH	253..306	CDD:188720	20/66 (30%)
		LIM5_PINCH	314..367	CDD:188721

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810