DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup93-1 and NIC96

DIOPT Version :9

Sequence 1:NP_572929.1 Gene:Nup93-1 / 32350 FlyBaseID:FBgn0027537 Length:823 Species:Drosophila melanogaster
Sequence 2:NP_116657.1 Gene:NIC96 / 850552 SGDID:S000001898 Length:839 Species:Saccharomyces cerevisiae


Alignment Length:893 Identity:183/893 - (20%)
Similarity:365/893 - (40%) Gaps:151/893 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KQAQRLTNE-TNTDTEVPGVERTMSQVLQATKEFHSRVTQMGTND------LQAHILLGSKGVDL 65
            |.|.:..|| ..:...:|.....:..:..:..|...||.|:.:.:      .:||.||.:.|:..
Yeast    16 KGANKKLNELLESSDNLPSASSELGSIQVSINELRRRVFQLRSKNKASKDYTKAHYLLANSGLSF 80

  Fly    66 PKLTQKLESLSARQTFEPIDP--VTETNVQAYLKNERENAILSVIDETNRSIFKSVERQKWRCIY 128
            ..:...::.|...|..||..|  :....::.|::.::|..||..|::......|..:......:.
Yeast    81 EDVDAFIKDLQTNQFLEPNPPKIIESEELEFYIRTKKEENILMSIEQLLNGATKDFDNFINHNLN 145

  Fly   129 SEWGEEKEALLNALVGPNQQDFPDVQFQIVPTAMADEPTP-------------YSQLNGHE---- 176
            .:|.:.|..::... |...||...|..:...::: |...|             .|:||.:|    
Yeast   146 LDWAQHKNEVMKNF-GILIQDKKTVDHKKSISSL-DPKLPSWGNKGNNILNSNESRLNVNENNIL 208

  Fly   177 ----QMYAEQIAIHNQSIILGRRPN--------LLSTLAHVVQDSFNDESVAEMWNVLQFMTALP 229
                :.||..:...|.|    |:.|        .:|.|:..  :...:..:.|.|.:|:.|    
Yeast   209 REKFENYARIVFQFNNS----RQANGNFDIANEFISILSSA--NGTRNAQLLESWKILESM---- 263

  Fly   230 PVSSTIDPIKNRQTSPQFVEQARTYLERRYRTYMRKFIVANLAKARRGGIPSVYHMVRSYVGVTL 294
                     |::..:  .||..:.|||:::..|.......|:.:    |:.:..:.::|::...|
Yeast   264 ---------KSKDIN--IVEVGKQYLEQQFLQYTDNLYKKNMNE----GLATNVNKIKSFIDTKL 313

  Fly   295 QGQRALYGLHD--VNNGQPLWPHVYYSLRSGDMDAAALYLKESGTC-----PDLLTLLTLRKNGD 352
            :.....:.:.:  |.||.|:|..::|.||:|.:..|...|.|:...     ...||......:..
Yeast   314 KKADKSWKISNLTVINGVPIWALIFYLLRAGLIKEALQVLVENKANIKKVEQSFLTYFKAYASSK 378

  Fly   353 RDNLMVKLEGQLKLEYNSRLRACT--DPYKKAVYVVLLACDPHFTHVELMR-SIDDFLWMQLSIL 414
            ...|.|:...:|..|||..:::..  |||:.|||.::..||....::..:. ||:|:|||.|.::
Yeast   379 DHGLPVEYSTKLHTEYNQHIKSSLDGDPYRLAVYKLIGRCDLSRKNIPAVTLSIEDWLWMHLMLI 443

  Fly   415 RRSD-QSDSNTEQLTFSGLQSLILEKYGENYFNAREKAALYFQVLTLTGQFEAAIEFLARTEKNR 478
            :..| ::|...|:.:....|::|: .||.:.|     :..|.|.|.|:|.:..||::....  :.
Yeast   444 KEKDAENDPVYERYSLEDFQNIII-SYGPSRF-----SNYYLQTLLLSGLYGLAIDYTYTF--SE 500

  Fly   479 THAIHMAIALNEISMLGTPRSVEQSLLSSDPDDPKPMKRLNLVRLIVMYTKCFERTDTTQALHYY 543
            ..|:|:||.|..:.:.        .:.||.....||.:.:....::..|||.|..:|...|:.|.
Yeast   501 MDAVHLAIGLASLKLF--------KIDSSTRLTKKPKRDIRFANILANYTKSFRYSDPRVAVEYL 557

  Fly   544 YLLRNFKSENGRGNVMLTCVCDLLVEKCDDEMLELIFGTED--------KKNGLRYGGIYAEFQ- 599
            .|:...:....             ||.|.:.:.||:..|::        .::|.|..|:..|.| 
Yeast   558 VLITLNEGPTD-------------VELCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQP 609

  Fly   600 -IHECDKYSLAEMVGDELSKRGD-----YELAIELYFIGGQLDKALRLVNSLLA---------QV 649
             :|..|:......:.::.::|.|     |: :|.||.:..:.|..:.||||||:         |.
Yeast   610 LLHVRDEKEFLHTITEQAARRADEDGRIYD-SILLYQLAEEYDIVITLVNSLLSDTLSASDLDQP 673

  Fly   650 VHQPTQNGS-----VRNRLGDIINRLDAALVVRKSDVE-VQVVVTYTVLTKVMKFFDHYHEGALR 708
            :..|..|..     :..|:..|.  .|.|.:.|:..|: .::.:....::.:.:.:.:.......
Yeast   674 LVGPDDNSETNPVLLARRMASIY--FDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETL 736

  Fly   709 SALEILTNNHLIPAS-SLEVDECVTNIKRMGPEVIKVLPDILLASMDIVYQEYVKLMDSNETASG 772
            |.:|:|   .|:|.| .|...:...:...:...::|.:|::|:.::..: ...:.:::.::..|.
Yeast   737 SQMELL---DLLPFSDELSARKKAQDFSNLDDNIVKNIPNLLIITLSCI-SNMIHILNESKYQSS 797

  Fly   773 FFDESKCVNKEPAVKHLRDRAKAFTNMAASVPYRMPSTTNQRLVQLEI 820
                    .|...:..|::.|:.....|..:.||||..|...|:.:::
Yeast   798 --------TKGQQIDSLKNVARQCMIYAGMIQYRMPRETYSTLINIDV 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup93-1NP_572929.1 Nic96 215..808 CDD:309288 134/634 (21%)
NIC96NP_116657.1 Nic96 252..825 CDD:397976 134/635 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345183
Domainoid 1 1.000 114 1.000 Domainoid score I1326
eggNOG 1 0.900 - - E1_KOG2168
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I1207
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59183
OrthoFinder 1 1.000 - - FOG0002723
OrthoInspector 1 1.000 - - otm46509
orthoMCL 1 0.900 - - OOG6_103333
Panther 1 1.100 - - O PTHR11225
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R780
SonicParanoid 1 1.000 - - X3522
TreeFam 1 0.960 - -
1413.790

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