DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup93-1 and AT2G41620

DIOPT Version :10

Sequence 1:NP_572929.1 Gene:Nup93-1 / 32350 FlyBaseID:FBgn0027537 Length:823 Species:Drosophila melanogaster
Sequence 2:NP_565951.1 Gene:AT2G41620 / 818760 AraportID:AT2G41620 Length:861 Species:Arabidopsis thaliana


Alignment Length:947 Identity:180/947 - (19%)
Similarity:355/947 - (37%) Gaps:233/947 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELLKQAQRLTNETNTDTEVPGVERTMSQVLQATKEFHSRV--TQMGTNDLQAHILLGSKGVDLPK 67
            :||..:.:|..:....::.|.::|.:.|:...:|:..::.  .:..:..:.|..||..:|::..:
plant    12 DLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQSIAATRLLAREGINAEQ 76

  Fly    68 LTQKLESLSARQTFEPIDPVTETNVQAYLKNERENAILSVIDETNRSIFKSVERQKWRCIYSEWG 132
            |.:.|:|...:.|||.:.|...|:|:.||:...|.|::|.|.|..:...:|......:.:..:|.
plant    77 LARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQKDNVRSFNDYMMKVLEEDWR 141

  Fly   133 EEKEALLNALVGPNQQDFPDVQF----------QIVPTAMADEPTPYSQLNGHEQMYAEQIAIH- 186
            :||...|.:|...:.  .|....          |:||...:..   .|...|.|.:....|.|| 
plant   142 KEKRDFLQSLSRISM--LPKTNMIDTSREAHAGQLVPVGSSPR---VSSTPGKELVALANIPIHE 201

  Fly   187 NQSIILGRRPNLLSTL---------AHVVQDSFN----------DESVAEMWNVLQFMTALPPVS 232
            .::.:.|.....|:|.         |...:|:::          ..::.::|.::|.:|.  ..|
plant   202 KKAYVYGEVVKKLNTSRERGMPFRPAMCFKDAYDTLGAEVTRGKSVNMQKIWQLVQAITG--EDS 264

  Fly   233 STIDPIKNRQTSPQFVEQARTYLERRYRTYMRKFIVANLAKARRGGIPSVYHMVRSYVGVTLQGQ 297
            :....:..|..   ....||.:|:..:..::...|..:..:|..||.......:|:::.:.|:. 
plant   265 AVRQGVSKRMA---LAIGARHHLQHGHEKFIMDTIQTHPTQAALGGSVGNLQRIRAFLRIRLRD- 325

  Fly   298 RALYGLHDVNN----GQP----LWPHVYYSLRSGDMDAAALYLKESGTCPDLLTLLT--LRKNGD 352
               ||:.|.::    .||    .|..:|:.||:|..:.|....:.:.:......|||  :..:| 
plant   326 ---YGVLDFDSTDARRQPPVDTTWQQIYFCLRTGYYEEAREIARSTRSSQQFAPLLTEWITTDG- 386

  Fly   353 RDNLMVKLEG--------QLKLEYNSRL-RACTDPYKKAVYVVLLACDPHFTHV-----ELMRSI 403
                ||..|.        :..|....|| |...|..|..:|.::.........:     .|..:|
plant   387 ----MVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIERILRDLSTLFNTI 447

  Fly   404 DDFLWMQLSILRRSDQSDSNTEQLTFSGLQ-------SLILEKYGENYFNAREKAAL-YFQVLTL 460
            :||||.:||.:|  |.:..::..:...||.       ...|.|:..:|:....|..| |..||.|
plant   448 EDFLWFKLSCIR--DVTGGSSSVVLNDGLAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLL 510

  Fly   461 TGQFEAAIEFLARTEKN---RTHAIHMAIALNEISML--GTPRSVEQSLLSSDPDDPKPMKRLNL 520
            :.|...||..|::...:   ...|:|:||:|.:.|:|  |:....:.|::.|:.:...       
plant   511 SVQLLPAIMHLSKEAGDGGYNIDAVHIAISLVDHSVLSEGSGTGHKLSVMDSNAEASS------- 568

  Fly   521 VRLIVMYTKCF-ERTDTTQALHYYYLLR-----NFKSENGRGNVMLTCVCDLLVEKCDDEMLELI 579
              :|..|...| ...|....:.||....     ...:.:||.||......:|::::...|:|   
plant   569 --MIRQYGSMFLHHGDLQMTVEYYAQAAATVGGGQLAWSGRSNVDQQRQRNLMLKQLLTEIL--- 628

  Fly   580 FGTEDKKNGLRYGGIY------------------------AEFQI---HECDKYSLAEMVGDELS 617
                     ||..|||                        .:|.:   |:|.:..|         
plant   629 ---------LRERGIYFLLGARGSGEEGQLGRFFPDSRLRQQFLVEAAHQCQEAGL--------- 675

  Fly   618 KRGDYELAIELYFIGGQLDKALRLVNSLLAQVVHQPTQNGSVRNRLGDIINRLD-----AALVVR 677
                |:.:|||....|....||..:|..|::.:....:            .|||     :.|::.
plant   676 ----YDKSIELQKRVGAFSAALETINKCLSEAICSLAR------------GRLDGESRTSGLILA 724

  Fly   678 KSDVEVQVVVTYTVLTKVMKFFDHYHEGALRSALEILTNNHLIPASSLEVDECVTNIKRMG---- 738
            .:|              :::.:.:|.|.:|:....::....::  ..||....:..:.|:|    
plant   725 GND--------------ILETYKYYPEVSLQERERVMEQETIL--RELEAILSIHKLGRLGNHLD 773

  Fly   739 --PEVIKV--------LPDILLASMDIVYQEYVKLMDSNETASGFFDES---------KCVNKEP 784
              .|:.|:        :||   |:.|:.           ::||.:|...         .|::..|
plant   774 ALREIAKLPFLHLDPRMPD---ATADVF-----------QSASPYFQTCVPDLLKVALTCLDNVP 824

  Fly   785 ----AVKHLRDRAKAFTNMAASVPYRMPSTTNQRLVQ 817
                :::.:|.:...|  :|::.....|....:::.:
plant   825 DTDGSIRAMRSKIAGF--LASNTHRNWPRDLYEKVAR 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup93-1NP_572929.1 Nic96 215..814 CDD:461172 132/700 (19%)
AT2G41620NP_565951.1 Nic96 247..856 CDD:461172 132/702 (19%)

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