DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup93-1 and nup93

DIOPT Version :9

Sequence 1:NP_572929.1 Gene:Nup93-1 / 32350 FlyBaseID:FBgn0027537 Length:823 Species:Drosophila melanogaster
Sequence 2:NP_998879.1 Gene:nup93 / 407948 XenbaseID:XB-GENE-5823109 Length:820 Species:Xenopus tropicalis


Alignment Length:855 Identity:283/855 - (33%)
Similarity:456/855 - (53%) Gaps:78/855 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELLKQAQRLTNETNTDTEVPGVERTMSQVLQATKEFHSRV---TQMGTNDLQAHILLGSKGVDLP 66
            |||:||::|..||...||:|.|||.:.::.||.:...|:.   |...:.:::|.:||||:|:|:.
 Frog     8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSRGLDIS 72

  Fly    67 KLTQKLESLSARQTFEPIDPVTETNVQAYLKNERENAILSVIDETNRSIFKSVERQKWRCIYSEW 131
            .::|:||||||..||||::||.:|::|.:||||::||:||.|:|:.:..|...|......:..||
 Frog    73 HISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEW 137

  Fly   132 GEEKEALLNALV--GPNQQDFPDVQFQIVPTAMADEPTPY---------SQLNGHEQMYAEQIAI 185
            .:.|:.:|:.|:  |.:..||..           :..|.|         |.|:..|..||.||.:
 Frog   138 EQVKQRVLHTLLASGEDALDFTQ-----------ESETSYISESGAPGRSSLDNVEMAYARQIYM 191

  Fly   186 HNQSIILGRRPNLLSTLAHVVQDSFNDESVAEMWNVLQFMTALPPVSSTIDPIKNR---QTSPQF 247
            :|:.::.|.....|..|.....:..:|::|:::|.:::.||.:|.:.:: |.:|:|   |....|
 Frog   192 YNEKVVSGHLQPSLVELCTEAAERLDDKNVSDLWVMVKQMTDVPLIPAS-DSLKSRCSVQMQMAF 255

  Fly   248 VEQARTYLERRYRTYMRKFIVANLAKARRGGIPSVYHMVRSYVGVTLQGQRALYGLHDVN-NGQP 311
            :.||..:||:.|:.|....:.|||.:|:.||:|..|::|||::.:.|..  .:.||.|.. .|.|
 Frog   256 LRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRLPA--PIPGLQDGEVEGYP 318

  Fly   312 LWPHVYYSLRSGDMDAAALYLKESGTCPDLLTLLTLRKNGDRDN------------LMVKLEGQL 364
            :|..:||.:|.||:.||...:..:           ..:.||..|            |....|.:|
 Frog   319 VWALIYYCMRCGDLMAAQQVVNRA-----------QHQLGDFKNCFQEYVHSKDRRLSPTTENKL 372

  Fly   365 KLEYNSRLRACTDPYKKAVYVVLLACDPHFTHVELMRSIDDFLWMQLSILRRSDQSDSN-TEQLT 428
            :|.|...:||.|||||:.||.::..||....|.|:....:|:||::||.:...|:::|: .::||
 Frog   373 RLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLSQVCFEDEANSSPQDRLT 437

  Fly   429 FSGLQSLILEKYGENYFNAREKAALYFQVLTLTGQFEAAIEFLARTEKNRTHAIHMAIALNEISM 493
            ....|..:.|.|||::|...::..||||||.||.||||||.||.|.|:.|.||:|:|:||.|:.:
 Frog   438 LPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERTRCHAVHVALALFELKL 502

  Fly   494 LGTPRSVEQSLLSSDPDDPKPMKRLNLVRLIVMYTKCFERTDTTQALHYYYLLRNFKSENGRGNV 558
            |.........|||.:|.||:.::.||.:||:::||:.||.||..:||.|:|.|||.|...|. ::
 Frog   503 LLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDSQGE-SM 566

  Fly   559 MLTCVCDLLVEKCDDEMLELIFGTEDKKNGLRYGGIYAEFQIHECDKY-----SLAEMVGDELSK 618
            .|.||.:|::|..:.:||   .|..:|....:.|.|         ||:     ::...|......
 Frog   567 FLRCVSELVIESREFDML---LGKLEKDGSRKPGAI---------DKFTRDTKTIINKVASVAEN 619

  Fly   619 RGDYELAIELYFIGGQLDKALRLVNSLLAQVVHQPTQNGSVRNRLGDIINRLDAALVVRKSDVEV 683
            :|.:|.|.:||.:....||.|.|.|.||:.||.|.:...|.|.||.::...:......:....|.
 Frog   620 KGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSNRERLKNMALAIAERYKSQGVSAEK 684

  Fly   684 QVVVTYTVLTKVMKFFDHYHEGALRSALEILTNNHLIPASSLEVDECVTNIKRMGPEVIKVLPDI 748
            .:..|:.:|..::.|||.||.|.:..|.:::....|:|.|...|:|.|...:....|:...|.:|
 Frog   685 SINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKLVPLSQDSVEERVAAFRNFSDEIRHNLSEI 749

  Fly   749 LLASMDIVYQEYVKLMDSNETASGFFDESKCVNKEPAVKHLRDRAKAFTNMAASVPYRMPSTTNQ 813
            |||:|:|::.:|.:|..|.....|....:    :|.....||.:|:|....|..:||||...||.
 Frog   750 LLATMNILFTQYKRLKGSGPNTLGRPQRA----QEDKDSVLRSQARALITFAGMIPYRMSGDTNA 810

  Fly   814 RLVQLEILMH 823
            ||||:|:||:
 Frog   811 RLVQMEVLMN 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup93-1NP_572929.1 Nic96 215..808 CDD:309288 199/614 (32%)
nup93NP_998879.1 Nic96 220..805 CDD:367811 199/615 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 327 1.000 Domainoid score I1181
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 472 1.000 Inparanoid score I1471
OMA 1 1.010 - - QHG59183
OrthoDB 1 1.010 - - D187731at2759
OrthoFinder 1 1.000 - - FOG0002723
OrthoInspector 1 1.000 - - otm47535
Panther 1 1.100 - - O PTHR11225
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R780
SonicParanoid 1 1.000 - - X3522
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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