DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup93-1 and nup93

DIOPT Version :9

Sequence 1:NP_572929.1 Gene:Nup93-1 / 32350 FlyBaseID:FBgn0027537 Length:823 Species:Drosophila melanogaster
Sequence 2:NP_571056.2 Gene:nup93 / 30172 ZFINID:ZDB-GENE-990415-46 Length:820 Species:Danio rerio


Alignment Length:846 Identity:295/846 - (34%)
Similarity:460/846 - (54%) Gaps:60/846 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELLKQAQRLTNETNTDTEVPGVERTMSQVLQATKEFHSRV---TQMGTNDLQAHILLGSKGVDLP 66
            |||:||::|..||...:|:|.|||.:.::.||.:...||.   |...|.|::|.|||||:|:|:.
Zfish     8 ELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLGSRGLDIF 72

  Fly    67 KLTQKLESLSARQTFEPIDPVTETNVQAYLKNERENAILSVIDETNRSIFKSVERQKWRCIYSEW 131
            .::|:||||||..||||::||.:|::|.:|||||:||:||.|:|:.|..|...|......:..:|
Zfish    73 HISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRDSMLVQW 137

  Fly   132 GEEKEALLNALVGPNQQDFPDVQFQIVPTAMADEPTP-YSQLNGHEQMYAEQIAIHNQSIILGR- 194
            .:.|:.:|:.|:|.. :|..|...::.|:.:::...| .|.|:..|..|:.||.:.|:.|:.|. 
Zfish   138 EQVKQRVLHTLLGAG-EDALDFSQEVEPSFVSEVGVPGRSALDSVEVAYSRQIYVFNEKIVNGHL 201

  Fly   195 RPNLLSTLAHVVQDSFNDESVAEMWNVLQFMT--ALPPVSSTIDPIKNRQTSPQFVEQARTYLER 257
            :|| |..|...|.:|.:|::|:|||.:::.||  .|.|...|:....:......||.||..:||.
Zfish   202 QPN-LGDLCASVAESLDDKNVSEMWLMVKQMTDVLLVPAKDTLKSRVSVDMQMAFVRQALQFLEN 265

  Fly   258 RYRTYMRKFIVANLAKARRGGIPSVYHMVRSYVGVTLQGQRALYGLHDVN-NGQPLWPHVYYSLR 321
            .|:.|....:..||.:|:.||:|..|.:|.|::.:.|  ...|.|..|.. .|.|:|..:|:.||
Zfish   266 SYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKL--PTPLPGRQDGEVEGHPVWALIYFCLR 328

  Fly   322 SGDMDAA--------------ALYLKESGTCPDLLTLLTLRKNGDRDNLMVKLEGQLKLEYNSRL 372
            .||:.||              .::.:|....||             ..|....|.:|:|.|...|
Zfish   329 CGDLSAAMQVVNKAQHQLGDFKIWFQEYMNSPD-------------RRLSPATENKLRLHYRRVL 380

  Fly   373 RACTDPYKKAVYVVLLACDPHFTHVELMRSIDDFLWMQLS-ILRRSDQSDSNTEQLTFSGLQSLI 436
            |...||||:|||.::..||....|.|:....:|:||::|: :....|.|.|..:::|.:.||..:
Zfish   381 RNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLNQVCFDEDGSSSPQDRMTLAQLQKQL 445

  Fly   437 LEKYGENYFNAREKAALYFQVLTLTGQFEAAIEFLARTEKNRTHAIHMAIALNEISMLGTPRSVE 501
            ||.|||::|:|..:..||||||.||.||||||.||.|.|:.|:||:|:|:.|.|:.:|.......
Zfish   446 LEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFLFRVERLRSHAVHVALVLYELKLLLKSSGQS 510

  Fly   502 QSLLSSDPDDPKPMKRLNLVRLIVMYTKCFERTDTTQALHYYYLLRNFKSENGRGNVMLTCVCDL 566
            ..|||.:..||..::|||.:||:::||:.||.||..:||.|:|.|||.|...|. |:.:.||.:|
Zfish   511 AQLLSQEAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE-NMFMRCVSEL 574

  Fly   567 LVEKCDDEMLELIFGTEDKKNGLRYGGIYAEFQIHECDKYSLAEMVGDELSKRGDYELAIELYFI 631
            ::|..:.:||   .|..: |:|.|..|:..:|   ..|..::...|..|...:|.:|.|::||.:
Zfish   575 VIESREFDML---LGRLE-KDGSRKPGVIDKF---AGDTRAIITKVASEAENKGLFEEAVKLYEL 632

  Fly   632 GGQLDKALRLVNSLLAQVVHQPTQNGSVRNRLGD----IINRLDAALVVRKSDVEVQVVVTYTVL 692
            ....||.|.|:|.||:.|:.|.::..|.:.||.:    |..|..|..|..:..|:    .|:.:|
Zfish   633 AKNADKVLELMNKLLSPVIAQVSEPQSNKERLKNMAVAIAERYRANGVAGEKSVD----NTFYLL 693

  Fly   693 TKVMKFFDHYHEGALRSALEILTNNHLIPASSLEVDECVTNIKRMGPEVIKVLPDILLASMDIVY 757
            ..:|.|||.||.|.:..|.:::....|:|.|...|:|.|...:....||...|.::|||:|:|::
Zfish   694 LDLMTFFDEYHAGHIDRAYDVIERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILF 758

  Fly   758 QEYVKLMDSNETASGFFDESKCVNKEPAVKHLRDRAKAFTNMAASVPYRMPSTTNQRLVQLEILM 822
            .:|.:|..:.....|....:    .|.....||.:|:|....|..:||||...||.||||:|:||
Zfish   759 TQYKRLKGAAAGTPGRPQRT----LEDRDMLLRIQARALITFAGMIPYRMAGDTNARLVQMEVLM 819

  Fly   823 H 823
            :
Zfish   820 N 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup93-1NP_572929.1 Nic96 215..808 CDD:309288 203/614 (33%)
nup93NP_571056.2 GluZincin 4..>127 CDD:301352 56/118 (47%)
Nic96 220..804 CDD:282017 202/614 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590017
Domainoid 1 1.000 318 1.000 Domainoid score I1230
eggNOG 1 0.900 - - E1_KOG2168
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 468 1.000 Inparanoid score I1496
OMA 1 1.010 - - QHG59183
OrthoDB 1 1.010 - - D187731at2759
OrthoFinder 1 1.000 - - FOG0002723
OrthoInspector 1 1.000 - - otm26138
orthoMCL 1 0.900 - - OOG6_103333
Panther 1 1.100 - - O PTHR11225
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R780
SonicParanoid 1 1.000 - - X3522
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.