DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and AT1G19550

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_173386.1 Gene:AT1G19550 / 838542 AraportID:AT1G19550 Length:153 Species:Arabidopsis thaliana


Alignment Length:76 Identity:19/76 - (25%)
Similarity:42/76 - (55%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 INDHLSARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFT 218
            :.:||.:.:..|:.|:.:...|..|.|:|.|::||..:|..:.:|.....:..||..::.||:|.
plant    70 LENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFE 134

  Fly   219 QSCPADQDIIN 229
            ::...::.:|:
plant   135 KTKTEEKCVIS 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359
O-ClC 21..231 CDD:129941 19/76 (25%)
GST_C_CLIC 118..232 CDD:198307 19/76 (25%)
AT1G19550NP_173386.1 PLN02378 <9..153 CDD:166019 19/76 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D974249at2759
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm3083
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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