DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and Clic4

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_114006.1 Gene:Clic4 / 83718 RGDID:61857 Length:253 Species:Rattus norvegicus


Alignment Length:242 Identity:75/242 - (30%)
Similarity:119/242 - (49%) Gaps:28/242 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SQETNGSSKFD-VPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP 72
            |...||..:.| .|.|||.:||.: ||...|.|.|.|..||.|:    ||.:...|||||:::.|
  Rat     4 SMPLNGLKEEDKEPLIELFVKAGS-DGESIGNCPFSQRLFMILW----LKGVVFSVTTVDLKRKP 63

  Fly    73 PDFRTNFEATHPPILIDNGLAILENEKIERHIMKNI--PGGYNLFVQDKEVATLIENLYVK---- 131
            ...:.....||||.:..|.....:..|||..:.:.:  |....|..:..|..|...:::.|    
  Rat    64 AHLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAY 128

  Fly   132 LKLMLVKKDEAKNNALLSHLRKINDHLS----------------ARNTRFLTGDTMCCFDCELMP 180
            :|....:.:||....||..|:|::::|:                :...|||.||.|...||.|:|
  Rat   129 IKNSRPEANEALERGLLKTLQKLDEYLNSPLPGEIDENSMEDIKSSTRRFLDGDEMTLADCNLLP 193

  Fly   181 RLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDI 227
            :|..::|..|.:.:|:||..:|.:|||:.:.|..|.||.:||:|:::
  Rat   194 KLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 33/96 (34%)
O-ClC 21..231 CDD:129941 71/229 (31%)
GST_C_CLIC 118..232 CDD:198307 38/130 (29%)
Clic4NP_114006.1 Required for insertion into the membrane. /evidence=ECO:0000250 2..101 35/101 (35%)
GST_N_CLIC 14..104 CDD:239359 33/94 (35%)
O-ClC 17..252 CDD:129941 71/229 (31%)
GST_C_family 111..251 CDD:295467 38/130 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347862
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4688
OMA 1 1.010 - - QHG57946
OrthoDB 1 1.010 - - D541338at33208
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm45221
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43920
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.010

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