DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and gdap1

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001018511.1 Gene:gdap1 / 553702 ZFINID:ZDB-GENE-050522-424 Length:362 Species:Danio rerio


Alignment Length:125 Identity:26/125 - (20%)
Similarity:42/125 - (33%) Gaps:22/125 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 HPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYV----KLKLMLVKKDEAK 143
            ||.|.:|:.:.......|...|.........|.|::.:    :::.|:    :||..|...|..|
Zfish   157 HPEITVDSHIPAYATTHIRTQIGNTESELKKLAVENPD----LKDAYIAKQRRLKSKLFDHDNMK 217

  Fly   144 N-NALLSHLRKINDHLSARNTR-------------FLTGDTMCCFDCELMPRLQHIRVAG 189
            . ..||..|..:.|.:.....|             :|.||.....|..|...|..::..|
Zfish   218 YLKKLLDELENVLDQVETELQRRSEETPEEGSQQAWLCGDFFSIADVSLAVTLHRLKFLG 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 6/28 (21%)
O-ClC 21..231 CDD:129941 26/125 (21%)
GST_C_CLIC 118..232 CDD:198307 18/90 (20%)
gdap1NP_001018511.1 GstA 40..307 CDD:223698 26/125 (21%)
GST_N_GDAP1 40..112 CDD:239350
GST_C_family 193..304 CDD:295467 18/89 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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