DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clic and clic3

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_031747833.1 Gene:clic3 / 447989 XenbaseID:XB-GENE-959390 Length:240 Species:Xenopus tropicalis


Alignment Length:230 Identity:70/230 - (30%)
Similarity:105/230 - (45%) Gaps:25/230 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPIL 87
            :||.:|||. ||...|.|.|.|..||.|.    .|.:...:|||||::.|...|.....:.||.|
 Frog     9 LELFVKASD-DGESIGHCPFSQRLFMILI----HKGVPFTLTTVDMKRAPEVLRDLAPGSQPPFL 68

  Fly    88 IDNGLAILENEKIERHIMKNI-PGGY-NLFVQDKEVATLIENLYVK----LKLMLVKKDEAKNNA 146
            :.|.....:..|||..:.:.: |..| .:..:.||......:::.|    :|..|..:::|....
 Frog    69 LYNNEVKTDTNKIEEFLEELLQPPSYPKMAPEHKESFQAGSDVFHKFSAYIKNQLPAQEDALQRN 133

  Fly   147 LLSHL--------------RKINDHLSARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEI 197
            ||..|              .|.|.:.|....:||.|||:...||.|:|:|..|....||:..|||
 Frog   134 LLKSLLLLDKYMLVPLPQELKANPNQSVSQRKFLDGDTLTLPDCNLLPKLNIINTVCKYYRKFEI 198

  Fly   198 PTHLTALWRYMYHMYQLDAFTQSCPADQDIINHYK 232
            |..|..:.|||.:..|:..|..:||..::|:..|:
 Frog   199 PKDLKGVTRYMENASQMKEFKYTCPNTEEILLFYR 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 30/89 (34%)
O-ClC 21..231 CDD:129941 69/227 (30%)
GST_C_CLIC 118..232 CDD:198307 38/131 (29%)
clic3XP_031747833.1 O-ClC 9..232 CDD:129941 69/227 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I4764
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D541338at33208
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm48288
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

Return to query results.
Submit another query.