DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and clic2

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001002561.2 Gene:clic2 / 436834 ZFINID:ZDB-GENE-040718-299 Length:239 Species:Danio rerio


Alignment Length:229 Identity:78/229 - (34%)
Similarity:118/229 - (51%) Gaps:25/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPP 85
            |.|||.|||.. ||...|.|.|||..||.|:    ||.:...||||||:|.|.:.:.....|:||
Zfish    11 PRIELFIKAGH-DGENVGNCPFCQRLFMVLW----LKGVKFTVTTVDMRKKPDELKDLAPGTNPP 70

  Fly    86 ILIDNGLAILENEKIERHIMKNI-PGGY-NLFVQDKEVATLIENLYVKLKLMLVKKDEAKN---- 144
            .|:.||....:..|||..:...: |..| :|..:.||...:..:::.|....:  |:...|    
Zfish    71 FLLYNGTLKTDFIKIEEFLETTLAPPRYPHLSPRYKESFDVGADIFAKFSAFI--KNSPNNAFHE 133

  Fly   145 NALLSHLRKINDHL------------SARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEI 197
            .|||...::::|:|            |....:||.|:.:...||.|:|:|..|:||.:.:.:|:|
Zfish   134 KALLREFKRLDDYLNTPLQDELDQNISVSKRKFLDGNRLTLADCNLLPKLHVIKVAARKYCNFDI 198

  Fly   198 PTHLTALWRYMYHMYQLDAFTQSCPADQDIINHY 231
            ||..|.:|||:...|:.:.|:|:||||.:|...|
Zfish   199 PTQFTGVWRYLQSAYEREEFSQTCPADIEIEKAY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 37/91 (41%)
O-ClC 21..231 CDD:129941 77/227 (34%)
GST_C_CLIC 118..232 CDD:198307 39/130 (30%)
clic2NP_001002561.2 O-ClC 11..238 CDD:129941 78/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589576
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I4748
OMA 1 1.010 - - QHG57946
OrthoDB 1 1.010 - - D541338at33208
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm24777
orthoMCL 1 0.900 - - OOG6_107975
Panther 1 1.100 - - O PTHR43920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2518
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.940

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