DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and clic1

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_988889.1 Gene:clic1 / 394484 XenbaseID:XB-GENE-479419 Length:240 Species:Xenopus tropicalis


Alignment Length:233 Identity:65/233 - (27%)
Similarity:113/233 - (48%) Gaps:27/233 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPP 85
            |::||.:||:. ||:..|.|.|.|..||.|:    ||.::..||||||:|.|...:.......||
 Frog     5 PQVELFLKAAN-DGQSIGNCPFSQRLFMVLW----LKGVTFNVTTVDMKKKPDILKDLAPGAQPP 64

  Fly    86 ILIDNGLAILENEKIERHIMKNI-PGGY-NLFVQDKEVATLIENLYVKLKLMLVKKDEAKNNA-- 146
            .|:..|....:..|||..:.:.: |..| .|..:::|..|...:::.:....:...:.|.|.:  
 Frog    65 FLLFAGEVRTDTNKIEEFLEETLCPPKYPKLACRNQESNTAGLDVFARFSAYIKNSNPAPNQSVE 129

  Fly   147 --LLSHLRKINDHLS----------------ARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFV 193
              ||..|:.::.:|:                ..|.:||.|:.:...||.|:|:|..::|..::|.
 Frog   130 KGLLKALKVLDIYLNTPQIDEIDENSAEDEPVSNRKFLDGNELTLADCNLLPKLNIVQVVCEHFR 194

  Fly   194 DFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDIINHY 231
            .|:||...|.:.||:.:.|:.:.|..:||...:|:..|
 Frog   195 GFKIPAEFTGIHRYLQNAYKREEFASTCPDAAEIVRAY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 32/91 (35%)
O-ClC 21..231 CDD:129941 64/231 (28%)
GST_C_CLIC 118..232 CDD:198307 31/134 (23%)
clic1NP_988889.1 PLN02817 5..240 CDD:330276 65/233 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I4764
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D541338at33208
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm48288
Panther 1 1.100 - - O PTHR43920
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.160

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