DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clic and clic4

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_958894.1 Gene:clic4 / 368255 ZFINID:ZDB-GENE-030326-3 Length:252 Species:Danio rerio


Alignment Length:237 Identity:76/237 - (32%)
Similarity:117/237 - (49%) Gaps:27/237 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NGSSKFDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRT 77
            ||....:.|.|||.:||.: ||...|.|.|.|..||.|:    ||.:...|||||:::.|.|.:.
Zfish     8 NGLKGDNEPVIELFVKAGS-DGESIGNCPFSQRLFMILW----LKGVVFNVTTVDLKRKPADLQN 67

  Fly    78 NFEATHPPILIDNGLAILENEKIERHIMKNI-PGGYN-LFVQDKEVATLIENLYVKLKLMLVKK- 139
            ....||||.:..||....:..|||.::...: |..|: |..:..|..|...:::.|....:... 
Zfish    68 LAPGTHPPFITFNGEVKTDVNKIEEYLEDILCPPKYSKLGARHPESNTAGMDIFAKFSAFIKNSK 132

  Fly   140 ---DEAKNNALLSHLRKINDHL----------------SARNTRFLTGDTMCCFDCELMPRLQHI 185
               :||....||..|:|::::|                .|....||.|:.|...||.|:|:|..:
Zfish   133 PDANEALERGLLKTLQKLDEYLCSPLPDEIDHNSMEEVKASTRMFLDGEEMTLADCNLLPKLHIV 197

  Fly   186 RVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDI 227
            :|..|.:..||||..||.:|||:.:.|:.:.||.:||:|::|
Zfish   198 KVVAKKYRGFEIPKDLTGIWRYLNNAYKREEFTNTCPSDKEI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 34/94 (36%)
O-ClC 21..231 CDD:129941 74/229 (32%)
GST_C_CLIC 118..232 CDD:198307 38/130 (29%)
clic4NP_958894.1 GST_N_CLIC 13..103 CDD:239359 34/94 (36%)
O-ClC 16..250 CDD:129941 74/229 (32%)
GST_C_CLIC4 110..250 CDD:198329 38/130 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589451
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I4748
OMA 1 1.010 - - QHG57946
OrthoDB 1 1.010 - - D541338at33208
OrthoFinder 1 1.000 - - FOG0000394
OrthoInspector 1 1.000 - - otm24777
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43920
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.010

Return to query results.
Submit another query.