DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and Gdap1l1

DIOPT Version :9

Sequence 1:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038961050.1 Gene:Gdap1l1 / 311616 RGDID:1304960 Length:369 Species:Rattus norvegicus


Alignment Length:151 Identity:35/151 - (23%)
Similarity:53/151 - (35%) Gaps:32/151 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYVKLKLML 136
            |.|..|:....||.:..|:.:......:|.||:..   ...:|...|.|...|.|....|.|.::
  Rat   156 PMDAYTHGCILHPELTTDSMIPKYATAEIRRHLAN---ATTDLMKLDHEEPQLSEPYLSKQKKLM 217

  Fly   137 VK----KDEAKNNALLSHLRKINDHLSAR-NTRFL--TGDTMCCFDCEL---------------- 178
            .|    .|......:|..|..:.|.:.|. ..|.|  .|.|     |||                
  Rat   218 AKILEHDDVGYLKKILGELAMVLDQIEAELEKRKLENEGQT-----CELWLCGCAFTLADVLLGA 277

  Fly   179 -MPRLQHIRVAGKYFVDFEIP 198
             :.||:.:.::.||:.|...|
  Rat   278 TLHRLKFLGLSKKYWEDGSRP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 9/39 (23%)
O-ClC 21..231 CDD:129941 35/151 (23%)
GST_C_CLIC 118..232 CDD:198307 25/105 (24%)
Gdap1l1XP_038961050.1 Thioredoxin_like 47..122 CDD:412351
GST_C_family 203..313 CDD:413470 23/101 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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