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Protein Alignment Clic and Gsto1

DIOPT Version :9

Sequence 1:	NP_001259537.2	Gene:	Clic / 32349	FlyBaseID:	FBgn0030529	Length:	260	Species:	Drosophila melanogaster
Sequence 2:	NP_001007603.1	Gene:	Gsto1 / 114846	RGDID:	70952	Length:	241	Species:	Rattus norvegicus

Alignment Length:	202	Identity:	39/202 - (19%)
Similarity:	69/202 - (34%)	Gaps:	62/202 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    40 CLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLA-ILENEKIERH 103
            |.|.|...|.|    :.|.|..::..::::..|..|   ||..  |.    ||. :|||  .:.|
  Rat    32 CPFAQRTLMVL----KAKGIRHEIININLKNKPEWF---FEKN--PF----GLVPVLEN--TQGH 81

  Fly   104 IM-------KNIPGGY---NLFVQD---KEVATLIENLYVKLKLMLVKKDEAK--------NNAL 147
            ::       :.:...|   .||..|   |....:...|:.|:..::.....||        ...|
  Rat    82 LITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPSLVTSFIRAKRKEDHPGIKEEL 146

  Fly   148 LSHLRKINDHLSARNTRFLTGDTMCCFDCELMPRLQHIR-------------------------V 187
            .....|:.:.::.:.|.|..|:::...|..:.|..|.:.                         |
  Rat   147 KKEFSKLEEAMAKKRTAFFGGNSLSMIDYLIWPWFQRLEALELNECIDHTPKLKLWMATMQEDPV 211

  Fly   188 AGKYFVD 194
            |..:|:|
  Rat   212 ASSHFID 218

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.