DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11095 and PCD1

DIOPT Version :9

Sequence 1:NP_572927.1 Gene:CG11095 / 32348 FlyBaseID:FBgn0030528 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_013252.1 Gene:PCD1 / 850844 SGDID:S000004141 Length:340 Species:Saccharomyces cerevisiae


Alignment Length:226 Identity:71/226 - (31%)
Similarity:99/226 - (43%) Gaps:45/226 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SQRRCMEKMRSLPAFPRPK-ALTPSRRE-----KQTSAVLIAL-CQERGTNEISLLYTRRSRHLR 111
            ||||.:...:.:....|.| ..||..|.     |:.|||:|.| ...:|  |:.:|.|:|||.||
Yeast     4 SQRRMLSSKQLIENLIRYKFHKTPYTRSSIWPFKRNSAVIILLFIGMKG--ELRVLLTKRSRTLR 66

  Fly   112 SHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRIQVWGEAKQLQ-----------LPRT- 164
            |.|..:|||||:.|....::...|.||.||||||| |..:|..:...::           |.|| 
Yeast    67 SFSGDVSFPGGKADYFQETFESVARREAEEEIGLP-HDPEVLHKEFGMKLDNLVMDMPCYLSRTF 130

  Fly   165 SSIVPVVGVVPDFSLSEL---------------RLNWEEVEEAFSVPLTSL---MLPKATRHTQF 211
            .|:.|:|..:....|.:.               :||..|....|||||..|   :||:|....: 
Yeast   131 LSVKPMVCFLYKDKLEKHEDKYKVPLDIRKFFGKLNPGETSSLFSVPLNDLVIHLLPEADEDVK- 194

  Fly   212 RSGYSGPVFVVDHYRI-W-GITGYLTHLFLH 240
              .|....|....|:: | ||...:.|...|
Yeast   195 --SYQAEYFERKEYKLNWGGIKWLIMHYHFH 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11095NP_572927.1 CoAse 84..238 CDD:239518 60/186 (32%)
PCD1NP_013252.1 CoAse 38..265 CDD:239518 61/192 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I1791
Isobase 1 0.950 - 0 Normalized mean entropy S4648
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001407
OrthoInspector 1 1.000 - - oto99798
orthoMCL 1 0.900 - - OOG6_101045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1771
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.700

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