DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11095 and ndx-3

DIOPT Version :9

Sequence 1:NP_572927.1 Gene:CG11095 / 32348 FlyBaseID:FBgn0030528 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001380056.1 Gene:ndx-3 / 173857 WormBaseID:WBGene00003580 Length:240 Species:Caenorhabditis elegans


Alignment Length:263 Identity:75/263 - (28%)
Similarity:123/263 - (46%) Gaps:48/263 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LHLNRHLVTSCSSAASATSSKPPDVDQSITADQLLGPESQRRCMEKMRSLPAFPRPKALTPSRRE 80
            |...|.|:..||.                   :..|.:::.:.::.:.|:||...|:.::.|...
 Worm     5 LSAQRSLINVCSR-------------------RFFGKDAKEQFLKNLSSIPASKHPRLVSDSDAN 50

  Fly    81 KQTSAVLIALCQERGTNEISLLYTRRSRHLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGL 145
            ...| |||.|....|.:  |:|.|:||.|||||..::.|||||.|..::: .:.|||||.||||:
 Worm    51 SAMS-VLIPLVTVDGRD--SVLLTKRSIHLRSHRGEVCFPGGRMDPGETT-TETALRETFEEIGV 111

  Fly   146 PRHRIQVWGEAKQ-LQLPRTSSIVPVVGVVPDFS-LSELRLNWEEVEEAFSVPLTSLMLPKATRH 208
            ....:::||..|. ::.....::.|:||.:.|.. |..|.:|.:||:..|::|:..|:  |....
 Worm   112 NAESVEIWGHLKSVIRRQADFNVTPIVGYISDERVLENLVVNSDEVQAVFTIPIDELI--KKAGL 174

  Fly   209 TQFRS--------GYSGPVFVVDH----------YRIWGITGYLTHLFLHCLLPPNLLPDCLKTN 255
            |:|:|        .:....|.|.|          .|:||::|.:.|..|..|.|.....|.:   
 Worm   175 TKFQSKRMKYTLPSFDSTEFKVHHNAPNEYLHSTQRVWGLSGVMLHQALTLLNPDVYKHDLI--- 236

  Fly   256 IKF 258
            :||
 Worm   237 VKF 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11095NP_572927.1 CoAse 84..238 CDD:239518 58/173 (34%)
ndx-3NP_001380056.1 CoAse 54..221 CDD:239518 57/172 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I5826
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41633
Inparanoid 1 1.050 97 1.000 Inparanoid score I3604
Isobase 1 0.950 - 0 Normalized mean entropy S4648
OMA 1 1.010 - - QHG52532
OrthoDB 1 1.010 - - D1253012at2759
OrthoFinder 1 1.000 - - FOG0001407
OrthoInspector 1 1.000 - - oto19459
orthoMCL 1 0.900 - - OOG6_101045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1771
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.720

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