DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10993 and nifk

DIOPT Version :10

Sequence 1:NP_572923.1 Gene:CG10993 / 32344 FlyBaseID:FBgn0030524 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001005639.1 Gene:nifk / 448106 XenbaseID:XB-GENE-940532 Length:276 Species:Xenopus tropicalis


Alignment Length:115 Identity:30/115 - (26%)
Similarity:48/115 - (41%) Gaps:17/115 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EESEPE---MPFSYKTQPDEGESVNGEAHTSDDGDEMELATFKAASKKGVIYISNLPKHMTLTRL 81
            |||.|.   :....:.|.|..:.|:.....|..|          |...|||||.::|:.:...:|
 Frog     3 EESVPSGSLLSLDPELQKDFQQKVHEIRRKSQVG----------AVSPGVIYIGHIPRALYEPQL 57

  Fly    82 REILGEYGAIGRAFLRSQKLSRKPHNFLFAEGWVEFKSKRVAKQIVPLLN 131
            ||...::|.:.|..|...|.:.....:    .:|||:...|||.:...:|
 Frog    58 REYFSQFGTVTRLRLSRSKKTGNSKGY----AYVEFECDEVAKIVADTMN 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10993NP_572923.1 RRM_ABT1_like 65..154 CDD:409707 20/67 (30%)
nifkNP_001005639.1 RRM_NIFK_like 42..115 CDD:409748 19/66 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..211
hNIFK_binding 200..251 CDD:463489
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..276
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.