DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11103 and Tm2d2

DIOPT Version :9

Sequence 1:NP_001033842.2 Gene:CG11103 / 32342 FlyBaseID:FBgn0030522 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001017444.1 Gene:Tm2d2 / 290833 RGDID:1306769 Length:213 Species:Rattus norvegicus


Alignment Length:216 Identity:105/216 - (48%)
Similarity:126/216 - (58%) Gaps:33/216 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLAFLVARQHDAQAIQARSDKEQPQTVVSGTAVQSVVPVQAQLGSGMGPSSSSSSASSASGGAGN 71
            ||...|:|.|...|                ||...:.|               |.|:...|.|.:
  Rat    25 LLLHCVSRSHSFNA----------------TAELDLTP---------------SGAAHLEGPAAS 58

  Fly    72 SAFY--PLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVF 134
            |..|  |..|.::||:||.:|:||..||||..||||.||..||||||||..|.:|||..|.|...
  Rat    59 SWEYSDPNSPVILCSYLPDEFVDCDAPVDHVGNATAYQELGYGCLKFGGQAYSDVEHTAVQCRAL 123

  Fly   135 ADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVW 199
            ..|||...|||||...||::||.|||:|||:||..||..|:||||||.||||||||||:||:|:|
  Rat   124 EGIECASPRTFLRKNKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIW 188

  Fly   200 WIIDVILLITNNLLPEDGSNW 220
            |.:|:|||||..|:|.|||||
  Rat   189 WFVDLILLITGGLMPSDGSNW 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11103NP_001033842.2 TM2 156..205 CDD:377473 34/48 (71%)
Tm2d2NP_001017444.1 TM2 145..194 CDD:377473 34/48 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334492
Domainoid 1 1.000 106 1.000 Domainoid score I6467
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12328
Inparanoid 1 1.050 210 1.000 Inparanoid score I3592
OMA 1 1.010 - - QHG57548
OrthoDB 1 1.010 - - D1278556at2759
OrthoFinder 1 1.000 - - FOG0007509
OrthoInspector 1 1.000 - - oto96928
orthoMCL 1 0.900 - - OOG6_107239
Panther 1 1.100 - - LDO PTHR21016
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5640
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.910

Return to query results.
Submit another query.