DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and AT1G29080

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_564320.1 Gene:AT1G29080 / 839783 AraportID:AT1G29080 Length:346 Species:Arabidopsis thaliana


Alignment Length:245 Identity:66/245 - (26%)
Similarity:98/245 - (40%) Gaps:47/245 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SRKQWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCGFGCN 157
            :.|.|.|...:..::.||.||.||||.|:.|:.....|..|..::  .|...|:.|......||.
plant   132 TNKDWRNEGAVTPVKSQGECGGCWAFSAIAAVEGLTKIARGNLIS--LSEQQLLDCTREQNNGCK 194

  Fly   158 GGFPGAAWSYWTR-KGIVSGGPYGSNQGCRPYEI--SPCEHHVNGTRPPCAHGGRTPKCSHVCQS 219
            ||....|::|..: :||.|...|       ||::  .||.   :..||.            :...
plant   195 GGTFVNAFNYIIKHRGISSENEY-------PYQVKEGPCR---SNARPA------------ILIR 237

  Fly   220 GYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYE-DLILYKDGVYQHEHGKELGG 283
            |:.              :|..|......|.::..||..|....| ..:.|..|||...:......
plant   238 GFE--------------NVPSNNERALLEAVSRQPVAVAIDASEAGFVHYSGGVYNARNCGTSVN 288

  Fly   284 HAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILRG----QDHCGI 329
            ||:.::|:|. ..|.:.|||..|||...||::|:.||.|.    |..||:
plant   289 HAVTLVGYGT-SPEGMKYWLAKNSWGKTWGENGYIRIRRDVEWPQGMCGV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358
Peptidase_C1A_CathepsinB 88..336 CDD:239111 66/245 (27%)
AT1G29080NP_564320.1 PTZ00203 4..328 CDD:185513 63/234 (27%)
Inhibitor_I29 39..95 CDD:214853
Peptidase_C1 135..345 CDD:278538 65/242 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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