DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and AT1G02300

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_563647.1 Gene:AT1G02300 / 839576 AraportID:AT1G02300 Length:379 Species:Arabidopsis thaliana


Alignment Length:366 Identity:143/366 - (39%)
Similarity:195/366 - (53%) Gaps:59/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NLLLLVATAASVAALTSGEPSLLSDEFIEVVRSKAKT-WTVGRN--FDASVTEGHIRRLMGV--H 61
            ||..:.|...|...|||   .:|.:|.::.|...... |....|  | |:.|....:||:||  .
plant    24 NLQGIAAENLSKQKLTS---LILQNEIVKEVNENPNAGWKAAFNDRF-ANATVAEFKRLLGVIQT 84

  Fly    62 PDAHKFALPDKREVLGDLYVNSVDELPEEFDSRKQWPNCPTI-----GEIRDQ------------ 109
            |......:|..|.   ||.:    :||:|||:|..|.:|.:|     |.|.:.            
plant    85 PKTAYLGVPIVRH---DLSL----KLPKEFDARTAWSHCTSIRRILVGYILNNVLLWSTITLWFW 142

  Fly   110 ---GSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCH-TCGFGCNGGFPGAAWSYWTR 170
               |.|||||||||||::|||.||..  .:|...||:|:::||. .||||||||||..||.|:..
plant   143 FLLGHCGSCWAFGAVESLSDRFCIKY--NLNVSLSANDVIACCGLLCGFGCNGGFPMGAWLYFKY 205

  Fly   171 KGIVSGGPYGSNQGCRPY-EISPCEHHVNGTRPPCAHGGRTPKCSHVCQSGYTVDYAKDKHFGSK 234
            .|:|:       |.|.|| :.:.|.|      |.|.....||||...|.|...: :.:.||:|..
plant   206 HGVVT-------QECDPYFDNTGCSH------PGCEPTYPTPKCERKCVSRNQL-WGESKHYGVG 256

  Fly   235 SYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILYKDGVYQHEHGKELGGHAIRILGWGVW--GEE 297
            :|.:..:.::|..|:..|||||.|||||||...||.|||::..|.::||||::::|||..  ||:
plant   257 AYRINPDPQDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKYITGTKIGGHAVKLIGWGTSDDGED 321

  Fly   298 KIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIESSISAGLP 338
               |||:.|.||..|||.|:|:|.||.:.||||.|:.||||
plant   322 ---YWLLANQWNRSWGDDGYFKIRRGTNECGIEQSVVAGLP 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358 13/44 (30%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 114/271 (42%)
AT1G02300NP_563647.1 Propeptide_C1 43..85 CDD:311860 12/42 (29%)
Peptidase_C1A_CathepsinB 104..357 CDD:239111 114/271 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 241 1.000 Domainoid score I582
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37550
Inparanoid 1 1.050 254 1.000 Inparanoid score I1013
OMA 1 1.010 - - QHG53545
OrthoDB 1 1.010 - - D865289at2759
OrthoFinder 1 1.000 - - FOG0001215
OrthoInspector 1 1.000 - - otm3264
orthoMCL 1 0.900 - - OOG6_101151
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1059
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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