DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and AT5G17140

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_197216.1 Gene:AT5G17140 / 831578 AraportID:AT5G17140 Length:112 Species:Arabidopsis thaliana


Alignment Length:97 Identity:31/97 - (31%)
Similarity:53/97 - (54%) Gaps:16/97 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SYSVRRNV--REIQEEIMTNGPVE------GAF-TVYEDLILYKDGVYQHEHGKE-LGGHAIRIL 289
            |:..:.|.  .||:..::|.||:.      |.| .|||    :| |:|.....|| :..||:.|:
plant     7 SFITKPNATPEEIRGLLLTQGPIGISVDLCGIFRQVYE----FK-GIYVLPEPKENMERHALIIV 66

  Fly   290 GWGVWGEEKIPYWLIGNSWNTDWGDHGFFRIL 321
            |:|...:.|: ::::.|:|.|.||.:|:.||:
plant    67 GFGTTKDSKL-FFIVQNTWGTKWGFNGYARII 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358
Peptidase_C1A_CathepsinB 88..336 CDD:239111 31/97 (32%)
AT5G17140NP_197216.1 Peptidase_C1 <2..104 CDD:304901 31/97 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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