DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and AT5G17080

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_197210.1 Gene:AT5G17080 / 831571 AraportID:AT5G17080 Length:298 Species:Arabidopsis thaliana


Alignment Length:126 Identity:31/126 - (24%)
Similarity:56/126 - (44%) Gaps:11/126 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 AHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTN-------GPVEGAFTVY 262
            |.|.......||...|......:.|..|.|.::::....|:|.....:       |||.....:.
plant   149 AVGSMKKAFDHVFLKGIEKADGRKKGGGDKVFTIKGRFNEVQNATAIDIANKVDIGPVGITIDMS 213

  Fly   263 EDLILYKDGVYQHEHGKELGG--HAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRIL 321
            ..|...|||:|.....|: |.  ||:.|:.:|:..|::: ::::.|:|.|.|..:|..|::
plant   214 VGLRKLKDGIYMVPKPKD-GAPKHALTIVAYGMTKEDEL-FFVVQNTWGTIWRVNGEGRMI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358
Peptidase_C1A_CathepsinB 88..336 CDD:239111 31/126 (25%)
AT5G17080NP_197210.1 Peptidase_C1 76..285 CDD:239110 31/126 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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