DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and Ctsb

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_072119.2 Gene:Ctsb / 64529 RGDID:621509 Length:339 Species:Rattus norvegicus


Alignment Length:330 Identity:189/330 - (57%)
Similarity:238/330 - (72%) Gaps:16/330 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALTSG--EPSL--LSDEFIEVVRSKAKTWTVGRNFDASVTEGHIRRLMGVHPDAHKFALPDKREV 75
            ||||.  :||.  |||:.|..:..:..||..|||| .:|...::::|.|......|  ||::...
  Rat    13 ALTSAHDKPSFHPLSDDMINYINKQNTTWQAGRNF-YNVDISYLKKLCGTVLGGPK--LPERVGF 74

  Fly    76 LGDLYVNSVDELPEEFDSRKQWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHF 140
            ..|:      .|||.||:|:||.|||||.:||||||||||||||||||||||:|||:.|:||...
  Rat    75 SEDI------NLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEV 133

  Fly   141 SADDLVSCCH-TCGFGCNGGFPGAAWSYWTRKGIVSGGPYGSNQGCRPYEISPCEHHVNGTRPPC 204
            ||:||::||. .||.|||||:|..||::|||||:||||.|.|:.||.||.|.||||||||:||||
  Rat   134 SAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPCEHHVNGSRPPC 198

  Fly   205 AHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILYK 269
            ...|.||||:.:|::||:..|.:|||:|..||||..:.:||..||..||||||||||:.|.:.||
  Rat   199 TGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYK 263

  Fly   270 DGVYQHEHGKELGGHAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIESSIS 334
            .|||:||.|..:|||||||||||:  |..:||||:.||||.||||:|||:||||::||||||.|.
  Rat   264 SGVYKHEAGDVMGGHAIRILGWGI--ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIV 326

  Fly   335 AGLPK 339
            ||:|:
  Rat   327 AGIPR 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358 13/39 (33%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 162/248 (65%)
CtsbNP_072119.2 Propeptide_C1 26..65 CDD:285358 13/39 (33%)
Peptidase_C1A_CathepsinB 81..328 CDD:239111 162/248 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 381 1.000 Domainoid score I807
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37550
Inparanoid 1 1.050 401 1.000 Inparanoid score I1873
OMA 1 1.010 - - QHG53545
OrthoDB 1 1.010 - - D439739at33208
OrthoFinder 1 1.000 - - FOG0001215
OrthoInspector 1 1.000 - - oto97827
orthoMCL 1 0.900 - - OOG6_101151
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1059
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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