DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and Ctss

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_063138486.1 Gene:Ctss / 50654 RGDID:621513 Length:342 Species:Rattus norvegicus


Alignment Length:305 Identity:86/305 - (28%)
Similarity:130/305 - (42%) Gaps:56/305 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TWTVGRNFDASVTEGHIRRLMGVHPDAHKFALPDKREVLGDLYVNSVDELPEEFDSRKQWPNCPT 102
            :::||.|....:|...:...||      ...:|......|.|..:|...||:..|.|::  .|.|
  Rat    82 SYSVGMNHMGDMTPEEVIGYMG------SLRIPRHWNRSGTLKSSSNQTLPDSVDWREK--GCVT 138

  Fly   103 IGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCGF---GCNGGFPGAA 164
              .::.||||||||||.||.|:..::.:.:|..|:  .||.:||.|.....:   ||.|||...|
  Rat   139 --NVKYQGSCGSCWAFSAVGALEGQLKLKTGKLVS--LSAQNLVDCSTEEKYGNKGCGGGFMTEA 199

  Fly   165 WSYWTRKGIVSGGPYGSNQGCRPYEI--SPCEHHVNGTRPPCAHGGRTPKCSHVCQSGYTVDYAK 227
            :.|     |:..|...| :...||:.  ..|.:........|:.....|                
  Rat   200 FQY-----IIDNGGIDS-EASYPYKAMDEKCHYDPKNRAATCSRYIELP---------------- 242

  Fly   228 DKHFGSKSYSVRRNVREIQEEIMTNGPVE-GAFTVYEDLILYKDGVYQHEHGKELGGHAIRILGW 291
               ||.:        ..::|.:.|.|||. |....:....||:.|||......|...|.:.::|:
  Rat   243 ---FGDE--------EALKEAVATKGPVSVGIDASHSSFFLYQSGVYDDPSCTENVNHGVLVVGY 296

  Fly   292 GVW-GEEKIPYWLIGNSWNTDWGDHGFFRILR-GQDHCGIESSIS 334
            |.. |::   |||:.|||...:||.|:.|:.| .::||||.|..|
  Rat   297 GTLDGKD---YWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365 6/25 (24%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 75/255 (29%)
CtssXP_063138486.1 None

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