DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsB1 and MGC114246

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001017509.1 Gene:MGC114246 / 498688 RGDID:1562210 Length:334 Species:Rattus norvegicus


Alignment Length:328 Identity:86/328 - (26%)
Similarity:125/328 - (38%) Gaps:73/328 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LTSGEPSLLSDEFIEVVRSKAKTWTVGRNFDASVTEGHIRRLMGVHP-DAHKFALPDKREVLGDL 79
            |.:||..|..:.|           |:..|.....|....|::|...| ..|:......:...|.:
  Rat    61 LHNGENGLGKNGF-----------TMEINEFGDTTGEEFRKMMVEFPVQTHREGKSIMKRAAGSI 114

  Fly    80 YVNSVDELPEEFDSRKQWPNCPTIGEIRDQGSCGSCWAF---GAVEAMSDRVCIHSGGKVNFHFS 141
            :...||           |.....:..:|.||:|.:||||   ||:||.:    |...||: ...|
  Rat   115 FPKFVD-----------WRKKGYVTPVRRQGNCNACWAFSVTGAIEAQT----IWQSGKL-IPLS 163

  Fly   142 ADDLVSCCHTCG-FGCNGGFPGAAWSYWTRK-GIVSGGPYGSNQGCRPYEISPCEHHVNGTRPPC 204
            ..:||.|....| .||.||....|:.|.... |:.|...|       |||         |...||
  Rat   164 VQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLQSEATY-------PYE---------GKDGPC 212

  Fly   205 AHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVE-GAFTVYEDLILY 268
            .:   .||.|....:|:.              |:..:...:...:.|.||:. |....:|....|
  Rat   213 RY---NPKNSSAEITGFV--------------SLPESEDILMVAVATIGPISAGIDASHESFKFY 260

  Fly   269 KDGVYQHEHGKELGG--HAIRILGWGVWGEEK--IPYWLIGNSWNTDWGDHGFFRILRGQ-DHCG 328
            |.|:| ||.......  |.:.::|:|..|.:.  ..||||.|||...||..|:.:|.:.: :||.
  Rat   261 KKGIY-HEPNCSSNSVTHGVLVVGYGFKGNDTGGDHYWLIKNSWGKQWGIRGYMKITKDKNNHCA 324

  Fly   329 IES 331
            |.|
  Rat   325 IAS 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358 7/40 (18%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 71/255 (28%)
MGC114246NP_001017509.1 PTZ00203 7..332 CDD:185513 86/328 (26%)
Inhibitor_I29 29..87 CDD:214853 8/36 (22%)
Peptidase_C1A 116..332 CDD:239068 73/262 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.