DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and ctsl.1

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001002368.1 Gene:ctsl.1 / 436641 ZFINID:ZDB-GENE-040718-61 Length:334 Species:Danio rerio


Alignment Length:378 Identity:102/378 - (26%)
Similarity:148/378 - (39%) Gaps:98/378 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLVATAASVAALTSGEPSLLSDEFIEVVRSKAKTWTV--GRNFDASVTEGH-------IRRLMGV 60
            :||..||.:|..::...||...||        ..|.:  |:::.::..|.|       .|:|:.|
Zfish     3 VLVVAAAFLAVASAASLSLEDMEF--------HAWKLKFGKSYRSAEEESHRQLTWLTNRKLVLV 59

  Fly    61 HPDAHKFALPDKREVLGDLYVNSVDELPEE------------------------FDSRK------ 95
            |.......|...|  ||..|.  .|...||                        |..||      
Zfish    60 HNMMADQGLKSYR--LGMTYF--ADMSNEEYRQLVFRGCLGSMNNTKARGGSTFFRLRKAAVVPD 120

  Fly    96 --QWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCG-FGCN 157
              .|.:...:.:|:||..|||||||.|..::..:....:|..|:  .|...||.|..:.| :||:
Zfish   121 TVDWRDKGYVTDIKDQKQCGSCWAFSATGSLEGQTFRKTGKLVS--LSEQQLVDCSGSYGNYGCD 183

  Fly   158 GGFPGAAWSY-WTRKGIVSGGPYGSNQGCRPYEISPCEHHVNGTRPPCAHGGRTPKCSHVCQSGY 221
            ||....|:.| ...||:.:...|       |||....|...|    |...|.   .|     :||
Zfish   184 GGLMDQAFQYIEANKGLDTEDSY-------PYEAQDGECRFN----PSTVGA---SC-----TGY 229

  Fly   222 TVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTV-YEDLILYKDGVYQHE--HGKELGG 283
             ||.|.    |.:|        .:||.:.|.||:..|... :....||..|||...  ...|| .
Zfish   230 -VDIAS----GDES--------ALQEAVATIGPISVAIDAGHSSFQLYSSGVYNEPDCSSSEL-D 280

  Fly   284 HAIRILGWGVW-GEEKIPYWLIGNSWNTDWGDHGFFRILRGQ-DHCGIESSIS 334
            |.:..:|:|.. |::   ||::.|||..|||..|:..:.|.: :.|||.::.|
Zfish   281 HGVLAVGYGSSNGDD---YWIVKNSWGLDWGVQGYILMSRNKSNQCGIATAAS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365 10/48 (21%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 79/286 (28%)
ctsl.1NP_001002368.1 Inhibitor_I29 26..86 CDD:462410 16/71 (23%)
Peptidase_C1 118..333 CDD:425470 74/251 (29%)

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