DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and Ctsw

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001019413.1 Gene:Ctsw / 293676 RGDID:1309354 Length:371 Species:Rattus norvegicus


Alignment Length:406 Identity:97/406 - (23%)
Similarity:144/406 - (35%) Gaps:149/406 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLVATAASVAALTSG---EPSLLSDEFIEVVRSKAKTWTVGRNFDASVTEGHIRRLMGVHPDAH 65
            |||.....|.:.||..   .|..|.:.|        |.:.:..|...|....:.||| |:.  ||
  Rat    13 LLLAGQGLSDSLLTKDAGPRPLELKEVF--------KLFQIQFNRSYSNPAEYTRRL-GIF--AH 66

  Fly    66 KFALPDK--------------------REVLGDLY---------VNSVDELPEEFDSRKQW---- 97
            ..|...:                    .|..|.||         :|...::..|     :|    
  Rat    67 NLAQAQRLQEEDLGTAEFGQTPFSDLTEEEFGQLYGHQRAPERILNMAKKVKSE-----RWGESV 126

  Fly    98 -PNCP------TIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCGFG 155
             |.|.      .|..|::||:|..|||..|.:.:.....|.:...|:  .|..:|:. |..||.|
  Rat   127 PPTCDWRKVKNIISSIKNQGNCRCCWAIAAADNIQTLWRIKTQQFVD--VSVQELLD-CDRCGNG 188

  Fly   156 CNGGFPGAAW-SYWT---RKGIVSGGPYGSNQGCRPYEISPCEHHVNGTRPPCAHGGRTPKCSHV 216
            |||||   .| :|.|   ..|:.|...|       |::                 |.:.|   |.
  Rat   189 CNGGF---VWDAYITVLNNSGLASEEDY-------PFQ-----------------GHQKP---HR 223

  Fly   217 CQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNG---------PVEGAFTVYEDLIL---YK 269
            |.:        ||:         |.|..||:..|.:.         .:.|..||..::.|   |:
  Rat   224 CLA--------DKY---------RKVAWIQDFTMLSSNEQVIAGYLAIHGPITVTINMKLLQYYQ 271

  Fly   270 DGVYQHEHG---KELGGHAIRILGWGVWGEEK------------------IPYWLIGNSWNTDWG 313
            .||.:....   ..|..|::.::|   :|:||                  .|||::.|||..:||
  Rat   272 KGVIKATPSTCDPHLVNHSVLLVG---FGKEKGGMQTGTLLSHSRKPRRSTPYWILKNSWGAEWG 333

  Fly   314 DHGFFRILRGQDHCGI 329
            :.|:||:.||.:.|||
  Rat   334 EKGYFRLYRGNNTCGI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358 9/39 (23%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 73/290 (25%)
CtswNP_001019413.1 Inhibitor_I29 40..96 CDD:214853 11/66 (17%)
Peptidase_C1 126..356 CDD:278538 71/277 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343567
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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