DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and F26E4.3

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_492593.2 Gene:F26E4.3 / 172827 WormBaseID:WBGene00009158 Length:452 Species:Caenorhabditis elegans


Alignment Length:334 Identity:115/334 - (34%)
Similarity:166/334 - (49%) Gaps:48/334 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GEPSLLSDEFIEVVRSKAKTWTVGRNFDA----SVTEGHIRRLMGVHPDAHKFALPDKREVLGDL 79
            |...|:..:.:|.:.:...:|: .||:.|    |:::|...||..:.|:.   ::.:..|:|   
 Worm   121 GTACLIQPDILEKIHTGRYSWS-ARNYSAFWGRSLSDGIKYRLGTLFPER---SVQNMNEIL--- 178

  Fly    80 YVNSVDELPEEFDSRKQWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADD 144
              ....||||.||:|.:|.  |.|..:.|||.|||.|:.......|||:.|.|.|::|...|:..
 Worm   179 --IKPRELPEHFDARDKWG--PLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQ 239

  Fly   145 LVSCCHTCGFGCNGGFPGAAWSYWTRKGIVSGG--PYGSNQGCRP-YEISPCEHHVN--GTRPPC 204
            |:||......||.||:...||.|..:.|:|...  ||.|.|...| :.:.|...:.|  |.|   
 Worm   240 LLSCNQHRQKGCEGGYLDRAWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLR--- 301

  Fly   205 AHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILYK 269
                        |.|| :.|....|.  :..|.|.....:||.|:||||||:..|.|:||..:|.
 Worm   302 ------------CPSG-SQDSTAFKM--TPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYA 351

  Fly   270 DGVYQH-----EHGKEL---GGHAIRILGWGVWGE--EKIPYWLIGNSWNTDWGDHGFFRILRGQ 324
            .|||||     :.|...   |.|::|:|||||...  :.|.|||..|||.|.||:.|:|::|||:
 Worm   352 GGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGE 416

  Fly   325 DHCGIESSI 333
            :||.|||.:
 Worm   417 NHCEIESFV 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365 10/43 (23%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 99/261 (38%)
F26E4.3NP_492593.2 Somatomedin_B 37..83 CDD:460034
Peptidase_C1A_CathepsinB 185..428 CDD:239111 99/261 (38%)
Blue background indicates that the domain is not in the aligned region.

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