DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB1 and Y65B4A.2

DIOPT Version :9

Sequence 1:NP_001259536.2 Gene:CtsB1 / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001293246.1 Gene:Y65B4A.2 / 171655 WormBaseID:WBGene00022026 Length:448 Species:Caenorhabditis elegans


Alignment Length:396 Identity:118/396 - (29%)
Similarity:176/396 - (44%) Gaps:102/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLLVATAASVAA--------LTSGEPSLLSDEFI-EVVR----SKAKTWTV--------GRNF- 45
            :|||:|....|..        :|.......:||:: ::||    |...||..        .|:: 
 Worm    60 ILLLLAVLGLVYGSFYLYRRYVTDANDKRDNDEYLRKLVRQVNDSPETTWKAKFNKFGVKNRSYG 124

  Fly    46 -----DASVTEGHIRRLMGVHPDAHKFALPD--KREVLGDLYVNSVDELPEEFDSRKQWPNCPTI 103
                 :.:..|.::.::       .||...|  ||. |.:|...:..::|:.||:|::|||||:|
 Worm   125 FKYTRNQTAVEEYVEQI-------RKFFESDAMKRH-LDELENFNSSDVPKNFDARQKWPNCPSI 181

  Fly   104 GEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCGFGCNGGFPGAAWSYW 168
            ..:.:||.||||:|..|....|||.||||.|......|.:|::.||..|| .|.||.|..|.:||
 Worm   182 SNVPNQGGCGSCFAVAAAGVASDRACIHSNGTFKSLLSEEDIIGCCSVCG-NCYGGDPLKALTYW 245

  Fly   169 TRKGIVSGGPYGSNQGCRPYEIS-----PCEHHVNGTRPPC----AHGGRTPKCSHVCQS-GYTV 223
            ..:|:|:||    ..|||||...     ||.        |.    |...||  |...||: .|..
 Worm   246 VNQGLVTGG----RDGCRPYSFDLSCGVPCS--------PATFFEAEEKRT--CMKRCQNIYYQQ 296

  Fly   224 DYAKDKHFGSKSYSV------------------------------RRNVRE----IQEEIMTNGP 254
            .|.:||||.:.:||:                              :.||.|    |::||:..||
 Worm   297 KYEEDKHFATFAYSMYPRSMTVSPDGKERVKVPTIIGHFNDKKTEKLNVTEYRDIIKKEILLYGP 361

  Fly   255 VEGAFTVYEDLILYKDGVYQHE-----HGKELGGHAIRILGWGVWGEEKIPYWLIGNSWNTDWGD 314
            ...||.|.|:.:.|..||::..     ..:.:..|.:|::|||. .::...|||..||:...|||
 Worm   362 TTMAFPVPEEFLHYSSGVFRPYPTDGFDDRIVYWHVVRLIGWGE-SDDGTHYWLAVNSFGNHWGD 425

  Fly   315 HGFFRI 320
            :|.|:|
 Worm   426 NGLFKI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsB1NP_001259536.2 Propeptide_C1 24..64 CDD:285358 9/58 (16%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 96/282 (34%)
Y65B4A.2NP_001293246.1 Peptidase_C1A_CathepsinB 166..444 CDD:239111 96/282 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D865289at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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