Protein Alignment rdgB and vib

DIOPT Version :9

• Sequence 1: NP_001259535.1
• Gene: rdgB / 32340
• FlyBaseID: FBgn0003218
• Length: 1297
• Species: Drosophila melanogaster
• Sequence 2: NP_001262726.1
• Gene: vib / 42306
• FlyBaseID: FBgn0267975
• Length: 273
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 123/280 - (43%)
• Similarity: 174/280 - (62%)
• Gaps: 25/280 - (8%)

  Fly     1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGP--GG---NGQYTK 60
            |.|||:|:.||||||||::|||:.:|:.|:|.: |.|.|:|::.|||::|.|  ||   :||||.
  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENT-GGGEGIEVLKNEPFEDFPLLGGKYNSGQYTY 64

  Fly    61 KIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCP-FVEK-FSLDIETYYYP-DNGYQ 122
            ||||:.:.:|.:|:.|.||.:|.:.|||||||||.||..|.| :::| |.:||.:.:.. |.|..
  Fly    65 KIYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTV 129

  Fly   123 DNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPL-AEDWLEEYWREVKG 186
            |||.:|:...|:.|.:..|||..|.:...||..:|||..:.|.||||||| ..||
  Fly   130 DNVHELTPDKLKVREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDW---------- 184

  Fly   187 KKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIED 251
            ||...|    :||.||:...||:::|:||::|.||.. :.|::....|||.:...|.|:|||:||
  Fly   185 KKHVNP----VMTCYKLVTCEFKWFGLQTRVENFIQK-SERRLFTNFHRQVFCSTDRWYGLTMED 244

  Fly   252 IRELERQTQLALAKKMGGGE 271
            ||.:|.||:..|.|....||
  Fly   245 IRAIEDQTKEELDKARQVGE 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgB	NP_001259535.1	SRPBCC_PITPNM1-2_like	1..268	CDD:176898	121/275 (44%)
		DDHD	746..924	CDD:280937
		LNS2	1072..1203	CDD:197870
vib	NP_001262726.1	SRPBCC_PITPNA-B_like	2..261	CDD:176897	120/274 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45455373
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5083
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D105030at6656
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10658
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850