Protein Alignment rdgB and pitpnb

DIOPT Version :9

• Sequence 1: NP_001259535.1
• Gene: rdgB / 32340
• FlyBaseID: FBgn0003218
• Length: 1297
• Species: Drosophila melanogaster
• Sequence 2: NP_989122.1
• Gene: pitpnb / 394727
• XenbaseID: XB-GENE-5775924
• Length: 271
• Species: Xenopus tropicalis
• Alignment Length: 268
• Identity: 114/268 - (42%)
• Similarity: 167/268 - (62%)
• Gaps: 20/268 - (7%)

  Fly     1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYK-DGPGGNGQYTKKIYH 64
            :||||||:.||::||||::.||:.:|:.|::.: |.|.|:|::.||||: ||.  .||||.||||
 Frog     2 VLIKEYRVLLPVSVEEYQVGQLFSVAEASKDNT-GGGEGIEVLKNEPYELDGE--KGQYTHKIYH 63

  Fly    65 VGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFV-EKFSLDIETYYYPDNGYQDNVFQL 128
            :.:.:||::|.:.|:.:|...|:|||||||.||..|..:: :.|.:.|||::.||.|.|:||..|
 Frog    64 LQSKVPGFVKMVAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDNFFVKIETWHKPDFGDQENVHGL 128

  Fly   129 SGSDLRNRIVDVIDIV-KDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTP 192
            ..:..:...|..|||. ..|:..|||...|||..:.|:|||||||.:||           |:...
 Frog   129 DSNTWKEVEVVPIDIADNSQINEGDYKANEDPACYRSEKTGRGPLKQDW-----------KKELA 182

  Fly   193 RNMSL--MTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIREL 255
            .|.|.  |.|||:..|:|::||:|.|:|:|||... :::....|||.:...|.|..||:||||.:
 Frog   183 NNPSCPHMCAYKLVTVKFQWWGLQGKVERFIHKQE-KRLFTNFHRQLFCSLDRWVELTMEDIRRM 246

  Fly   256 ERQTQLAL 263
            |.:||..|
 Frog   247 EDETQKEL 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgB	NP_001259535.1	SRPBCC_PITPNM1-2_like	1..268	CDD:176898	114/268 (43%)
		DDHD	746..924	CDD:280937
		LNS2	1072..1203	CDD:197870
pitpnb	NP_989122.1	SRPBCC_PITPNA-B_like	3..259	CDD:176897	114/267 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910