Sequence 1: | NP_001259535.1 | Gene: | rdgB / 32340 | FlyBaseID: | FBgn0003218 | Length: | 1297 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038939635.1 | Gene: | Pitpnm1 / 361694 | RGDID: | 1306710 | Length: | 1263 | Species: | Rattus norvegicus |
Alignment Length: | 1361 | Identity: | 579/1361 - (42%) |
---|---|---|---|
Similarity: | 779/1361 - (57%) | Gaps: | 204/1361 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
Fly 66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSG 130
Fly 131 SDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNM 195
Fly 196 SLMTAYKICRVEFRYWGMQTKLEKFIHDV---------------------ALRKMMLRAHRQAWA 239
Fly 240 WQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKS-APA 303
Fly 304 VPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFG 368
Fly 369 SKGALHSPVGSAHSFDLQSKKPHAKTAPRRHVANWRMERLEVDSKSNSDEEFFDC----LDTNET 429
Fly 430 --NSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLR 492
Fly 493 SSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAA-SELTAKKSDVTTFRGSFEAVMRQH 556
Fly 557 YPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFH 621
Fly 622 ETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGG 686
Fly 687 D----------------AATNINTHNPLSPRNS-----RLDDDERFIEADLDAKRLLVAPS---- 726
Fly 727 -PRRRRSSS----SSD-----SRATKLDFEVCDFFMFGSPLSVVLAARK--LHDAKAALPRPNCH 779
Fly 780 QVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFND---- 840
Fly 841 ---------------GNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYC 890
Fly 891 PEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIK 955
Fly 956 KRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLS 1020
Fly 1021 TEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMS 1085
Fly 1086 VTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPL 1150
Fly 1151 GHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAH 1215
Fly 1216 LAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRSNAFELQLANISPSSSNINSPSS 1276 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgB | NP_001259535.1 | SRPBCC_PITPNM1-2_like | 1..268 | CDD:176898 | 174/287 (61%) |
DDHD | 746..924 | CDD:280937 | 90/198 (45%) | ||
LNS2 | 1072..1203 | CDD:197870 | 82/130 (63%) | ||
Pitpnm1 | XP_038939635.1 | SRPBCC_PITPNM1-2_like | 1..278 | CDD:176898 | 175/308 (57%) |
DDHD | 708..898 | CDD:397132 | 91/199 (46%) | ||
LNS2 | 1042..1173 | CDD:197870 | 82/130 (63%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 391 | 1.000 | Domainoid score | I750 |
eggNOG | 1 | 0.900 | - | - | E1_COG5083 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1085 | 1.000 | Inparanoid score | I226 |
OMA | 1 | 1.010 | - | - | QHG48872 | |
OrthoDB | 1 | 1.010 | - | - | D122895at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002342 | |
OrthoInspector | 1 | 1.000 | - | - | otm45511 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104036 | |
Panther | 1 | 1.100 | - | - | O | PTHR10658 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1383 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.840 |