| Sequence 1: | NP_001259535.1 | Gene: | rdgB / 32340 | FlyBaseID: | FBgn0003218 | Length: | 1297 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038945373.1 | Gene: | Pitpnm2 / 304474 | RGDID: | 1310867 | Length: | 1385 | Species: | Rattus norvegicus |
| Alignment Length: | 1468 | Identity: | 613/1468 - (41%) |
|---|---|---|---|
| Similarity: | 810/1468 - (55%) | Gaps: | 315/1468 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
Fly 66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSG 130
Fly 131 SDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNM 195
Fly 196 SLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQ 260
Fly 261 LALAKKMGG-GEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGE 324
Fly 325 EEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQSKK 389
Fly 390 PHAKTAPRRH-VANWRMERLEVDSKSNSDEEFFDCLDTNE------TNSLAKWSSLELLGEGDDS 447
Fly 448 PPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTP 512
Fly 513 SCPTTILILVVHAGSVLD-AASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICT 576
Fly 577 DALGILSSLSPYSFDAS--PSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFL 639
Fly 640 KSEEGHGFSGQIVMLGDSMGSLLAYEALCRS------------NGS----------QPGT----- 677
Fly 678 -ASGASNSGGDAATNINTHNPLS------PRNSRLDD----------DERFIEAD---------- 715
Fly 716 -LDAKRLLVAPSPRRRRSSSSSDSRAT--KLDFEVCDFFMFGSPLSVVLAARKLHDAKAALP--- 774
Fly 775 ----RPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHP 835
Fly 836 Q------------H---------------FNDGNNLLAG-------------------------- 847
Fly 848 ------RRLSDASMQSTISGLIENVSLSTI---------HA------------------------ 873
Fly 874 ---------------------LQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVI 917
Fly 918 AFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQ 982
Fly 983 RLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPV 1047
Fly 1048 KMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLI 1112
Fly 1113 YITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKD 1177
Fly 1178 ISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNA-RMVIPRGCF 1241
Fly 1242 NLPGQTANPRRRSNAFELQLANISPSSSNINSPSSGNH 1279 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdgB | NP_001259535.1 | SRPBCC_PITPNM1-2_like | 1..268 | CDD:176898 | 173/266 (65%) |
| DDHD | 746..924 | CDD:280937 | 100/297 (34%) | ||
| LNS2 | 1072..1203 | CDD:197870 | 82/130 (63%) | ||
| Pitpnm2 | XP_038945373.1 | SRPBCC_PITPNM1-2_like | 1..258 | CDD:176898 | 173/266 (65%) |
| DDHD | 704..998 | CDD:397132 | 101/298 (34%) | ||
| SMP2 | <1041..>1190 | CDD:227415 | 97/148 (66%) | ||
| LNS2 | 1144..1275 | CDD:197870 | 82/130 (63%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 391 | 1.000 | Domainoid score | I750 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5083 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H7915 | |
| Inparanoid | 1 | 1.050 | 1085 | 1.000 | Inparanoid score | I226 |
| OMA | 1 | 1.010 | - | - | QHG48872 | |
| OrthoDB | 1 | 1.010 | - | - | D122895at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002342 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45511 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_104036 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10658 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1383 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.880 | |||||