Protein Alignment rdgB and Pitpna

DIOPT Version :10

• Sequence 1: NP_001259535.1
• Gene: rdgB / 32340
• FlyBaseID: FBgn0003218
• Length: 1297
• Species: Drosophila melanogaster
• Sequence 2: NP_058927.1
• Gene: Pitpna / 29525
• RGDID: 61885
• Length: 271
• Species: Rattus norvegicus
• Alignment Length: 265
• Identity: 114/265 - (43%)
• Similarity: 168/265 - (63%)
• Gaps: 13/265 - (4%)

  Fly     1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
            :|:||||:.||::|:||::.|||.:|:.|:.|: |.|.|||:::||||:...|..||||.||||:
  Rat     2 VLLKEYRVILPVSVDEYQVGQLYSVAEASKNET-GGGEGVEVLVNEPYEKDDGEKGQYTHKIYHL 65

  Fly    66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFV-EKFSLDIETYYYPDNGYQDNVFQLS 129
            .:.:|.:::.|.|:.||.:.|:|||||||.||..|..:: |.|.:.|||::.||.|.|:||.:|.
  Rat    66 QSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLGTQENVHKLE 130

  Fly   130 GSDLRNRIVDVIDIV-KDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPR 193
            ....::.....|||. :.|:...||..||||..|.|.|||||||..:|.:|.   |..|..|
  Rat   131 PEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQEL---VNQKDCP--- 189

  Fly   194 NMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQ 258
               .|.|||:..|:|::||:|.|:|.|||... :::....|||.:.|.|:|..||::|||.:|.:
  Rat   190 ---YMCAYKLVTVKFKWWGLQNKVENFIHKQE-KRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEE 250

  Fly   259 TQLAL 263
            |:..|
  Rat   251 TKRQL 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgB	NP_001259535.1	SRPBCC_PITPNM1-2_like	1..268	CDD:176898	114/265 (43%)
		DDHD	743..924	CDD:460725
		LNS2	1072..1203	CDD:197870
Pitpna	NP_058927.1	SRPBCC_PITPNA-B_like	3..260	CDD:176897	114/264 (43%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	251..271		2/5 (40%)