DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgB and PITPNC1

DIOPT Version :10

Sequence 1:NP_001259535.1 Gene:rdgB / 32340 FlyBaseID:FBgn0003218 Length:1297 Species:Drosophila melanogaster
Sequence 2:NP_036549.2 Gene:PITPNC1 / 26207 HGNCID:21045 Length:332 Species:Homo sapiens


Alignment Length:345 Identity:144/345 - (41%)
Similarity:200/345 - (57%) Gaps:38/345 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
            ||:|||||.:||||:||:|.|||||:|.|.|:| ..|.|||::.|||::|...||||:|:|..::
Human     1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQS-DRGEGVEVVQNEPFEDPHHGNGQFTEKRVYL 64

  Fly    66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSG 130
            .:.||.|.::::|| ...|.|:|||.||||.|.|||.|:.|||:.|||.|..:.|..|.:|....
Human    65 NSKLPSWARAVVPK-IFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEA 128

  Fly   131 SDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNM 195
            .|: .|.|..|||..|::....|.:.||||||.|:|||||.|.|.|.:.:        ||     
Human   129 KDV-EREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH--------QP----- 179

  Fly   196 SLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQ 260
             :|.:||:..|:|..||:||::|:|:|.| :|.::|..||||:||.|||:.:|::::||.||.||
Human   180 -IMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQ 242

  Fly   261 LALAKKMG--------GGEECSDDSVSEPYVSTAATAASTTGSE---------RKKSAPAVPPIV 308
            .|..||:|        ........||.....|..:|..||...|         ||||||..   :
Human   243 EATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPET---L 304

  Fly   309 TQQPPSAEASSDEEGEEEED 328
            |...|..:|:.:..|....|
Human   305 TLPDPEKKATLNLPGMHSSD 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgBNP_001259535.1 SRPBCC_PITPNM1-2_like 1..268 CDD:176898 125/266 (47%)
DDHD 743..924 CDD:460725
LNS2 1072..1203 CDD:197870
PITPNC1NP_036549.2 SRPBCC_PITPNC1_like 2..250 CDD:176899 124/265 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..332 18/61 (30%)
Blue background indicates that the domain is not in the aligned region.

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