Sequence 1: | NP_001259535.1 | Gene: | rdgB / 32340 | FlyBaseID: | FBgn0003218 | Length: | 1297 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006530277.1 | Gene: | Pitpnm2 / 19679 | MGIID: | 1336192 | Length: | 1385 | Species: | Mus musculus |
Alignment Length: | 1475 | Identity: | 616/1475 - (41%) |
---|---|---|---|
Similarity: | 813/1475 - (55%) | Gaps: | 329/1475 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
Fly 66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSG 130
Fly 131 SDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNM 195
Fly 196 SLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQ 260
Fly 261 LALAKKMG-----GGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSD 320
Fly 321 EEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDL 385
Fly 386 QSKKPHAKTAPRRH-VANWRMERLEVDSKSNSDEEFFD------CLDTNETNSLAKWSSLELLGE 443
Fly 444 GDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSA---SVDRSHDSSP 505
Fly 506 PGSPSTPSCPTTILILVVHAGSVLD-AASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMV 569
Fly 570 PCPSICTDALGILSSLSPYSFDAS--PSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAAN 632
Fly 633 IVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRS------------NGS----------QP 675
Fly 676 GT------ASGASNSGGDAATNINTHNPLS------PRNSRLDDDERFI----------EAD--- 715
Fly 716 --------LDAKRLLVAPSPRRRRSSSSSDSRAT--KLDFEVCDFFMFGSPLSVVLAARKLHDAK 770
Fly 771 AALP-------RPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLL 828
Fly 829 EVIQSHPQHFNDGNNLL------------------------------------------------ 845
Fly 846 --------AG---RRLSDASMQSTISGLIENVSLSTI---------HA----------------- 873
Fly 874 ----------------------------LQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASY 910
Fly 911 WESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVI 975
Fly 976 VQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSL 1040
Fly 1041 GYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQ 1105
Fly 1106 ELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITA 1170
Fly 1171 AYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNA-RM 1234
Fly 1235 VIPRGCFNLPGQTANPRRRSNAFELQLANISPSSSNINSPSSGNH 1279 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgB | NP_001259535.1 | SRPBCC_PITPNM1-2_like | 1..268 | CDD:176898 | 174/266 (65%) |
DDHD | 746..924 | CDD:280937 | 99/297 (33%) | ||
LNS2 | 1072..1203 | CDD:197870 | 82/130 (63%) | ||
Pitpnm2 | XP_006530277.1 | SRPBCC_PITPNM1-2_like | 1..258 | CDD:176898 | 174/266 (65%) |
DDHD | 704..998 | CDD:367219 | 100/298 (34%) | ||
SMP2 | <1041..>1190 | CDD:227415 | 97/148 (66%) | ||
LNS2 | 1144..1275 | CDD:197870 | 82/130 (63%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 389 | 1.000 | Domainoid score | I787 |
eggNOG | 1 | 0.900 | - | - | E1_COG5083 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H7915 | |
Inparanoid | 1 | 1.050 | 1028 | 1.000 | Inparanoid score | I274 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48872 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002342 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104036 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10658 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3231 |
SonicParanoid | 1 | 1.000 | - | - | X1383 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.860 |