Protein Alignment rdgB and Y54F10AR.1

DIOPT Version :10

• Sequence 1: NP_001259535.1
• Gene: rdgB / 32340
• FlyBaseID: FBgn0003218
• Length: 1297
• Species: Drosophila melanogaster
• Sequence 2: NP_497582.3
• Gene: Y54F10AR.1 / 190268
• WormBaseID: WBGene00021854
• Length: 270
• Species: Caenorhabditis elegans
• Alignment Length: 280
• Identity: 112/280 - (40%)
• Similarity: 164/280 - (58%)
• Gaps: 25/280 - (8%)

  Fly     1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTK----- 60
            |:|||||:.||::||||::.||:.:|:.|:.|: |.|.|||::.|||:.:.|..|||:||
 Worm     1 MIIKEYRVVLPMSVEEYQVGQLWSVAEASKAET-GGGEGVEVLKNEPFDNVPLLNGQFTKGQYTH 64

  Fly    61 KIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCP--FVEKFSLDIETYYYPDNGYQD 123
            ||||:.:.:|..::.:.||.:|.:.|||||||||.:|..|.|  ..|.|.:.|||.:.||||..:
 Worm    65 KIYHLQSKVPAILRKIAPKGSLAIHEEAWNAYPYCKTVVTNPDYMKENFYVKIETIHLPDNGTTE 129

  Fly   124 NVFQLSGSDLRNRIVDVIDIVKDQ--LWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKG 186
            |...|.|.:|..|.|..|:|..|.  |..||...:..|..|.|.|||||||:.:|        |.
 Worm   130 NAHGLKGDELAKREVVNINIANDHEYLNSGDLHPDSTPSKFQSTKTGRGPLSGNW--------KD 186

  Fly   187 KKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIED 251
            ..||      :|.|||:..|.|:::|.|..:|.:.| ....::..:.||:.:.|.|:|.|||:.|
 Worm   187 SVQP------VMCAYKLVTVYFKWFGFQKIVENYAH-TQYPRLFSKFHREVFCWIDKWHGLTMVD 244

  Fly   252 IRELERQTQLALAKKMGGGE 271
            |||:|.:.|..|.::...|:
 Worm   245 IREIEAKAQKELEEQRKSGQ 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgB	NP_001259535.1	SRPBCC_PITPNM1-2_like	1..268	CDD:176898	111/275 (40%)
		DDHD	743..924	CDD:460725
		LNS2	1072..1203	CDD:197870
Y54F10AR.1	NP_497582.3	SRPBCC	2..261	CDD:472699	110/274 (40%)