Sequence 1: | NP_001259535.1 | Gene: | rdgB / 32340 | FlyBaseID: | FBgn0003218 | Length: | 1297 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012813026.1 | Gene: | pitpnm2 / 100216221 | XenbaseID: | XB-GENE-1011954 | Length: | 1435 | Species: | Xenopus tropicalis |
Alignment Length: | 1494 | Identity: | 625/1494 - (41%) |
---|---|---|---|
Similarity: | 833/1494 - (55%) | Gaps: | 325/1494 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHV 65
Fly 66 GNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSG 130
Fly 131 SDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNM 195
Fly 196 SLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQ 260
Fly 261 LALAKKMG------------GGEE--CSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQ 311
Fly 312 PPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSP 376
Fly 377 VGSAHSFDLQSKKPHAKTAPRRH-VANWRMERLEVDSKSNSDEEFFDC---LDTNE---TNSLAK 434
Fly 435 WSSLELLGE---------GDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQ 490
Fly 491 LRS--SASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLD-AASELTAKKSDVTTFRGSFEAV 552
Fly 553 MRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIAD-VPIGAIPLLSVA 616
Fly 617 SPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSN---------- 671
Fly 672 --GS----------QPGTASGASNSGGDAATNINTHNPLS------PRNS---------RLDDDE 709
Fly 710 RFIEAD-----------LDAKRLLVAPSPRRRRSSSSSDSRAT-KLDFEVCDFFMFGSPLSVVLA 762
Fly 763 ARKLHDAKAALP-------RPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLG 820
Fly 821 NGQPLHLLEVIQSHPQHFNDGNNLLA--------------------------------------- 846
Fly 847 --------------------GRRLSDASMQSTISGLIENVSLSTI-------------------- 871
Fly 872 -------------------HALQN-----------------------------KWWGTKRLDYAL 888
Fly 889 YCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEG---IPFVGSNDDKDNASFHPGQPR 950
Fly 951 EKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGE 1015
Fly 1016 WTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSF 1080
Fly 1081 TASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGL 1145
Fly 1146 STDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSD 1210
Fly 1211 GYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRSNAFELQLANISPSSSNINSP 1274 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgB | NP_001259535.1 | SRPBCC_PITPNM1-2_like | 1..268 | CDD:176898 | 179/266 (67%) |
DDHD | 746..924 | CDD:280937 | 100/311 (32%) | ||
LNS2 | 1072..1203 | CDD:197870 | 85/130 (65%) | ||
pitpnm2 | XP_012813026.1 | SRPBCC_PITPNM1-2_like | 1..260 | CDD:176898 | 179/266 (67%) |
DDHD | 735..1043 | CDD:397132 | 101/312 (32%) | ||
SMP2 | <1050..>1235 | CDD:227415 | 117/188 (62%) | ||
LNS2 | 1189..1320 | CDD:197870 | 85/130 (65%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 406 | 1.000 | Domainoid score | I697 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H7915 | |
Inparanoid | 1 | 1.050 | 711 | 1.000 | Inparanoid score | I638 |
OMA | 1 | 1.010 | - | - | QHG48872 | |
OrthoDB | 1 | 1.010 | - | - | D122895at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002342 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR10658 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3231 |
SonicParanoid | 1 | 1.000 | - | - | X1383 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.110 |