DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOXD8 and unpg

DIOPT Version :9

Sequence 1:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:287 Identity:74/287 - (25%)
Similarity:94/287 - (32%) Gaps:110/287 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    56 NSAAGFPHA-PPQAHAHPHPSPP---------------------------PSGTGCGG------- 85
            :|.||.|.| .|||.|.|.|.||                           |:..|...       
  Fly   112 SSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRR 176

Human    86 -REGRGQEYFH-----------------------PGGGSPAAAYQAAPPPPPHPPP-------PP 119
             .|...|:|.|                       ||    .|..|...||..|..|       |.
  Fly   177 LAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPG----MAQLQEPTPPQAHSSPAKSGSHSPM 237

Human   120 PPP---------PCGGIACHG-----EPAKFYGYDNLQRQPIFTTQQEAELVQYPDC-------- 162
            .|.         .|.|.:|..     .|..:.|..:..|...:|....      .||        
  Fly   238 EPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDS------EDCSDDEGAQS 296

Human   163 KSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRR 227
            :...|.:|......|.|||.|:            .||.|..::..|.||||:||....||:...|
  Fly   297 RHEGGGMGGKDSQGNGSSSNSK------------SRRRRTAFTSEQLLELEREFHAKKYLSLTER 349

Human   228 IEVSHALALTERQVKIWFQNRRMKWKK 254
            .:::.:|.|:|.||||||||||.|||:
  Fly   350 SQIATSLKLSEVQVKIWFQNRRAKWKR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 28/141 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 10/46 (22%)
Homeobox 201..253 CDD:278475 25/51 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 74/287 (26%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.