DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOXD8 and unpg

DIOPT Version :10

Sequence 1:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:287 Identity:74/287 - (25%)
Similarity:94/287 - (32%) Gaps:110/287 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    56 NSAAGFPHA-PPQAHAHPHPSPP---------------------------PSGTGCGG------- 85
            :|.||.|.| .|||.|.|.|.||                           |:..|...       
  Fly   112 SSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRR 176

Human    86 -REGRGQEYFH-----------------------PGGGSPAAAYQAAPPPPPHPPP-------PP 119
             .|...|:|.|                       ||    .|..|...||..|..|       |.
  Fly   177 LAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPG----MAQLQEPTPPQAHSSPAKSGSHSPM 237

Human   120 PPP---------PCGGIACHG-----EPAKFYGYDNLQRQPIFTTQQEAELVQYPDC-------- 162
            .|.         .|.|.:|..     .|..:.|..:..|...:|....      .||        
  Fly   238 EPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDS------EDCSDDEGAQS 296

Human   163 KSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRR 227
            :...|.:|......|.|||.|:            .||.|..::..|.||||:||....||:...|
  Fly   297 RHEGGGMGGKDSQGNGSSSNSK------------SRRRRTAFTSEQLLELEREFHAKKYLSLTER 349

Human   228 IEVSHALALTERQVKIWFQNRRMKWKK 254
            .:::.:|.|:|.||||||||||.|||:
  Fly   350 SQIATSLKLSEVQVKIWFQNRRAKWKR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 28/141 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 10/46 (22%)
Homeodomain 198..254 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 74/287 (26%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 25/51 (49%)

Return to query results.
Submit another query.