Sequence 1: | NP_572919.1 | Gene: | Rtc1 / 32338 | FlyBaseID: | FBgn0020909 | Length: | 384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_955830.1 | Gene: | rtca / 321129 | ZFINID: | ZDB-GENE-030131-9687 | Length: | 363 | Species: | Danio rerio |
Alignment Length: | 373 | Identity: | 104/373 - (27%) |
---|---|---|---|
Similarity: | 170/373 - (45%) | Gaps: | 37/373 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 GSNFLKQRLILACLSGKPVKISQIRSEDETAPGLREYEISLIRLLDKITNGTKIELNPAGTSVMF 79
Fly 80 SPGLLHGGQLNH--DCCVQRGIGYYLDALIALGPFCKSPLQCTLRGVTNSKDSPSVDHIKGAALS 142
Fly 143 LLKRFLLVDEGLELKVVRRGVAPLGGGEIIFRCPVRKSLRAIQFQSQGMVKRIRGTVYACKVSP- 206
Fly 207 AMANRTVEAAKGCMLKFLPDVYIYTD--QNKGKMSGNSPGFGICLIAETTDGVCFAADCCSNTRE 269
Fly 270 ESEDTPSIPENLGKEVALRLLDEIYRGGCVDSSYQWLAALYIALGQKHVSKFLTGALSNYT---V 331
Fly 332 HFLQHLRDF-FSITFKLENPEAEDEDEAENVRGAQKVLMACVGIGYTN 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rtc1 | NP_572919.1 | RNA_Cyclase_Class_I | 7..349 | CDD:238447 | 95/342 (28%) |
18S_RNA_Rcl1p | 11..384 | CDD:274564 | 104/373 (28%) | ||
rtca | NP_955830.1 | RNA_Cyclase_Class_II | 8..339 | CDD:238446 | 95/344 (28%) |
RTC | 12..337 | CDD:279479 | 94/336 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0430 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |